Sphingopyxis sp. USTB-05: KEC45_14370
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Entry
KEC45_14370 CDS
T10625
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus03018
RNA degradation
Brite
Enzymes [BR:
spus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KEC45_14370
Messenger RNA biogenesis [BR:
spus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KEC45_14370
Ribosome biogenesis [BR:
spus03009
]
Prokaryotic type
rRNA helicases
KEC45_14370
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Other DBs
NCBI-ProteinID:
USI75946
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Position
3099194..3101053
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AA seq
619 aa
AA seq
DB search
MPFENLSPVLSDALVARGYEALTPVQTQVTEGEAKGRDLLVSAQTGSGKTVAFGLAMADE
LIEDGRLPFATSPLALIVAPTRELALQVSRELGWLYAKAGARIATCVGGMDASKERRALG
QGVQIVVGTPGRLRDHLERGALDLTALRVAVLDEADEMLDMGFRDDLEEILDGTPATRRT
LLFSATLPKPIVQLAKRYQQDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLH
DAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNAALQALRDRRAKVCVATD
VAARGIDLPTLSLVIHVEIPRDAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRG
ARINAEWMDAPTAADVRKRDQERLMEKLLTPVEHEPEDIELAQRLMAERTPEDIAASLVQ
AHRALMPPPEDLLDNSPRGRDAAGRPERGERFERPERGGDRRDGFEDSVWFRLNIGRHQN
ADPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRSANEDGEDDSG
VSITPAPDGPTYPPRRDKGGHGGPRDAAPRSTLGRAPGGDRGFGDRSGPRGPRGPGGPGG
NERYKPKPYGQRSPRRPSK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcgaaaatctttctcccgtcctttcggacgcccttgtcgcgcgcggctatgaa
gcgctcacccccgtccagacgcaagtcaccgagggcgaagccaagggccgcgacctgctc
gtctcggcgcagaccgggtcgggcaagaccgtcgccttcggcctcgcgatggccgacgag
ctgatcgaggacggccggctgccgttcgcaacctcgccgctcgcgctgatcgtcgcgccg
acgcgcgaactcgcgctgcaggtcagccgcgaactcggctggctctatgccaaggccggc
gcgcgcatcgcgacctgcgtcggcggtatggacgccagcaaggaacgccgtgcgctcggc
cagggcgtgcagatcgtcgtcggcacccccggccgcctccgcgaccatctggaacgcggc
gcgctcgacctcaccgcgctgcgggtcgccgtgctcgacgaagcagacgaaatgctcgac
atgggttttcgcgatgaccttgaggagatcctcgacggcacccccgcgacgcgccgcacg
cttcttttctcggcgacgctgccgaagccgatcgtccagctcgccaagcgttaccagcaa
gatgcgctgcgcatctccaccgtcggtgaagaccgcggccatggggacatcgcctatcag
gcggtaaccgtcgcccccgccgacatcgaaggcgcggtcgtcaacctgctccgtctgcac
gacgccgaaaccgcgatgctgttctgcgcgacgcgcgacaatgtgcgccgcctccacgcc
agcctggtggagcgcggtttcgccgcggtcgcgctgtcgggcgaacatagccagaatgag
cgcaacgcggcgctgcaagcccttcgcgaccgccgcgccaaggtttgcgtcgcgaccgac
gtcgccgcgcgcggcatcgatctgccgacgctcagccttgtcatccacgtcgaaatcccg
cgcgacgccgaagcgcttcagcaccgttcgggccgcaccggccgcgcgggcaaaaagggc
accgcggtcatcatcgtcccctatccgcgccgccgccgcgtcgacggcatgctgcgcggt
gcacgcatcaacgccgaatggatggatgcccccaccgccgccgacgtgcgcaagcgcgat
caggaacggctgatggaaaagctgctcacgcccgtcgagcatgagcccgaggatatcgaa
ctcgcgcagcgcctgatggccgagcgcacgcccgaagacattgccgcgtcgctcgtccag
gcgcaccgcgcgctgatgccgccgcccgaggacctgctcgacaacagcccgcgcggccgc
gacgccgccggccgccccgagcgcggcgagcgcttcgaacgccccgagcgtggcggcgac
cgccgcgacggattcgaggatagcgtctggttccgcctcaacatcggccgccaccagaat
gccgatccgcgctggatcctgcctttgctctgccgccgcggccatgtgagcaagaacgag
atcggcgcgatccgcatcggtcccaaggaaacgatgttcaacattccgcgcgcgatcgcc
gatcgctttgccgaggctgtggtacgcagcgccaacgaggatggcgaggacgacagcggc
gtttcgatcacccccgcgcccgacggtccgacctacccgccgcgccgcgataagggcggc
catggcggcccgcgcgacgccgctccgcgcagcacgctcggccgggcgccgggcggtgat
cgtgggttcggcgatcgttcgggcccgcgcggcccgcgtggccccggtggcccaggcggc
aacgaacgctacaagcccaagccctacggccagcgcagcccgcgtcgcccgtcgaagtaa
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