Sphingopyxis sp. USTB-05: KEC45_18135
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Entry
KEC45_18135 CDS
T10625
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00061
Fatty acid biosynthesis
spus00071
Fatty acid degradation
spus01100
Metabolic pathways
spus01212
Fatty acid metabolism
spus02024
Quorum sensing
spus04146
Peroxisome
Module
spus_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KEC45_18135
00071 Fatty acid degradation
KEC45_18135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KEC45_18135
09145 Cellular community - prokaryotes
02024 Quorum sensing
KEC45_18135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spus01004
]
KEC45_18135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spus04147
]
KEC45_18135
Enzymes [BR:
spus01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KEC45_18135
Lipid biosynthesis proteins [BR:
spus01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KEC45_18135
Exosome [BR:
spus04147
]
Exosomal proteins
Exosomal proteins of breast milk
KEC45_18135
Exosomal proteins of breast cancer cells
KEC45_18135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
USI76646
LinkDB
All DBs
Position
3917816..3919333
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AA seq
505 aa
AA seq
DB search
MTATVISGSNLITGSTIDQRAAKVATGLAEMGIGAGDTVAILLRNDPVFFEISFGANLLG
ANVVPVNWHFRSDEALFVIADSGAKLIVAHEDLLPVLGDHSSLSLPILVCPVPQEVAEAY
GSPVSTIDEWASWRDKHAEWRGEPQITRFGMIYTSGTTGKPKGVKREPADAEMAKRMAAL
MATALGLVPGQTIRTVITGPIYHAAPNTYALVAGRVGELVVMQPRFDAEGLLALIEHHRL
THVHLVPTMFVRLLKLPEQVRSKYDLSSLRFVAHGAAPCPPEIKQAMIAWWGPIIHEYYG
GSETGGAVYHNSEEALRKPGTVGRAMDGCAIRILDDEGNEVPAGTPGHVYIRSTSFPDFT
YHGRDADRLAIEREGFVTIGDIGFLDEDGYLFLCDRANDMIISGGVNIYPAEIEAVLLSH
PGIADAAVFGVPDAEFGEAVCAAIQPADIGGPDASEVRAFVRSKLAAFKAPRHVEFHSTL
PREDSGKILRRLLKEPHWAGTGRTI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaccgtcatcagtggatcaaacctgatcaccggcagtaccatcgaccagcgc
gctgccaaggtggcgactggattggccgagatgggcattggagctggtgacactgttgca
atcctgctccgcaacgatccggttttcttcgaaatttcgtttggagcaaaccttctgggg
gcaaatgtcgtaccagtaaactggcacttccgcagcgatgaagccttgttcgtgattgcc
gacagtggtgccaaactgattgtcgctcacgaggatctccttccggttctcggcgaccat
tcgtcactttcattgccgatcctggtctgtcctgtcccgcaagaggtcgccgaggcctac
ggcagtccggtctcgacaatcgatgaatgggcgagctggcgtgacaagcatgccgaatgg
cgaggcgaaccgcagatcacccgcttcggaatgatttacacgtcgggaaccacgggcaaa
ccaaagggcgtgaaacgagagccggcagatgctgagatggctaaacgcatggccgcgctg
atggcgacggcgctcggtcttgtccctggtcagacaatacgtacagtcataactggacca
atttatcacgccgcacccaacacgtacgcattggtagcgggccgtgtcggtgagttggtg
gtaatgcaaccgcgttttgacgccgaagggcttctagcgctcatcgagcatcaccgactt
actcatgttcacttggtaccgactatgtttgtgcgccttcttaagcttcccgagcaggtg
cgctcgaaatacgatctgtcatcgcttcggtttgtggcccacggcgcagcgccctgcccg
cctgagatcaaacaagccatgatcgcttggtgggggccgatcattcacgaatactacggc
ggcagcgagactggtggtgccgtttatcacaattccgaagaagccttgcgcaagcccgga
actgtcggtcgtgcaatggatggctgcgcgatccgcattcttgacgacgagggcaatgag
gtcccagccgggacccctggccatgtgtatattcgttcaaccagtttcccggactttacc
taccatggtcgcgatgctgaccgccttgcaatcgagcgcgaaggcttcgtcacgatcggc
gatatcgggtttctcgatgaagatggttatctgttcctctgcgatcgagcaaacgacatg
atcatttcgggaggggtcaacatctacccagcggagatcgaagccgttctactttcccat
ccaggcatcgcagacgcggccgtcttcggcgtacccgacgcagagtttggagaagccgtt
tgcgcggcgattcagcctgccgacattggcggacccgatgcctcggaagtaagggccttt
gtccgcagcaagctcgcagctttcaaggctcctcggcacgtcgaattccactccaccctg
cctcgtgaagactccggcaagatcctgcgtcgcttgctgaaggaaccacactgggcggga
accggaaggacaatctga
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