Sphingopyxis sp. USTB-05: KEC45_19595
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Entry
KEC45_19595 CDS
T10625
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus02020
Two-component system
spus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KEC45_19595
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KEC45_19595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spus03021
]
KEC45_19595
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spus02035
]
KEC45_19595
Transcription machinery [BR:
spus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KEC45_19595
Bacterial motility proteins [BR:
spus02035
]
Flagellar system
Flagellar assembly proteins
Stator
KEC45_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
USI76913
LinkDB
All DBs
Position
complement(4224203..4224949)
Genome browser
AA seq
248 aa
AA seq
DB search
MRIEPAEQFAGATGRTSRARGYGESVEALVEEYSPLVRKIAWQVFSRVSRTSELDDLIQT
GLIALIEASRNYEERGFAFATYATTRIRGAMIDQLRREADVGRSAMVAAKRIHAMRATLE
QQLMRTPTPAEMAVAFDMSAEDYFALERNATHGRSTSLDELTDIGAFLAADEDDSADERC
EQEDLMGALRQCVGRLSEREQMVLQLYFFEELNLHEIGLTLDVSAARICQIKREAMIKVD
RMIKEMTE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgagcccgccgagcagtttgccggggccaccggccggacgtcgcgtgcgcgc
ggctatggcgaaagcgtcgaggcactggtcgaggaatattcgccgctggtccgcaagatc
gcctggcaggtgttttcgcgcgtatcgcggacgagcgagctcgacgacctgatccagaca
ggtctgatcgcgctgatcgaggccagccgcaactatgaggaacgcggtttcgcctttgct
acctatgcaacgacccgcatacgcggcgcgatgatcgaccaactgcgccgggaggccgat
gttggccgttcggcgatggtcgcggcaaagcgcatccacgcaatgcgcgccacgctcgaa
cagcagttgatgcggacgccgacccctgccgaaatggcggtcgcgttcgacatgtcggcg
gaagattattttgcgctcgaacgcaatgcgacgcacggccgctcgacctcgctcgacgaa
ctcacggacatcggcgccttcctggcggccgacgaggatgacagcgcggacgagcggtgc
gagcaggaggatctgatgggcgcgctgcgccaatgtgtcggccgactctccgaacgtgag
caaatggtgctccagctctatttcttcgaagaactcaacctgcatgagatcggactgacg
ctcgacgtcagcgccgcgcggatctgccagatcaagcgcgaggcgatgatcaaagtcgac
cgcatgataaaggaaatgaccgaataa
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