Sphingopyxis sp. USTB-05: KEC45_19690
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Entry
KEC45_19690 CDS
T10625
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus02020
Two-component system
spus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KEC45_19690
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KEC45_19690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spus03000
]
KEC45_19690
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spus02035
]
KEC45_19690
Transcription factors [BR:
spus03000
]
Prokaryotic type
Helix-turn-helix
Other families
KEC45_19690
Bacterial motility proteins [BR:
spus02035
]
Flagellar system
Flagellar assembly proteins
Others
KEC45_19690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
AAA_16
AAA_7
IstB_IS21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
USI76930
LinkDB
All DBs
Position
4239231..4240304
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AA seq
357 aa
AA seq
DB search
MTVGHNNNPALEALIIGTSAAACRLREMIRRVARSNASVMLCGPSGSGKELVARAIHDEG
ARSGKAFSAINCGAIPGELIESELFGHEKGSFTGAHARRIGHFEASEGGTLFLDEIGDMR
FDMQVKLLRVLEDRTIVRVGSSEVKAVDVRVISATHQDLGAAIADGKFREDLFFRLGVVV
LQVPSLASRAEDIPALIRHFQRNMTAETKCRYDDAAMALLMQHAWPGNVRELRNFVERAS
VLHGGETLGLEDVVILLNPTAALAPRQAVPSSPAAVQASAEDFAAAPFASAAPQTKTPAP
GRPIDLKREIETIELEQIHVALDLADGIISEAARLLTLKRTTLIEKMRKYGVHQQAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggggcataacaataatccggcgctcgaagcgctgatcatcggcacgagcgcg
gcggcttgccggctgcgcgagatgatccgccgcgtggcgcgttcaaacgcctcggtgatg
ctctgcggcccgtcgggctccggcaaagaactcgtcgcccgtgcgatccacgacgaaggc
gctcgttcgggcaaagccttttccgcgatcaattgcggcgcgatccccggcgaactcatc
gaatccgaattgttcgggcatgaaaagggcagctttaccggcgcccatgcccgccgcatc
ggccatttcgaagcgagcgagggcggtacgctcttcctcgacgaaatcggggacatgcgt
ttcgacatgcaggtgaaactgctccgcgtgcttgaagaccggacgatcgtccgcgttggc
agcagcgaggttaaggccgtcgacgtccgcgtcatctcggccacccatcaggatctcggc
gctgcgatcgccgatggcaaattccgcgaagacctgttcttccggctcggcgtggttgtg
ctgcaggtccccagccttgccagccgcgccgaggatattccggcgctcatccgtcacttc
cagcgcaacatgacggcggagaccaagtgccgctatgacgatgccgctatggcgctgctg
atgcagcacgcttggccgggcaacgtccgcgaactgcgtaacttcgtggaacgcgccagt
gttctccatggcggcgagacgctcggtctcgaagatgtcgtcatccttctgaaccccacc
gcagcgcttgcgccgcggcaggctgtccccagcagccctgccgcggtgcaggccagcgcg
gaagactttgccgccgcgcccttcgcttcggccgcgccgcagacgaagacgccggcgccg
gggcgcccgatcgacctcaagcgtgagatcgagacaatcgaactcgaacagatccacgtc
gcgctcgaccttgccgatggcatcatttcggaagctgcgcgtctcctgacgctgaagcgc
acgacgcttatcgaaaagatgcgcaaatatggggttcaccagcaggctgcctga
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