Sphingopyxis sp. USTB-05: KEC45_20145
Help
Entry
KEC45_20145 CDS
T10625
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KEC45_20145 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spus03400
]
KEC45_20145 (xseA)
Enzymes [BR:
spus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KEC45_20145 (xseA)
DNA repair and recombination proteins [BR:
spus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KEC45_20145 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
USI77015
LinkDB
All DBs
Position
4337726..4339159
Genome browser
AA seq
477 aa
AA seq
DB search
MSVPFPDTASDDGTEARLLAEASPGDNAPALSVSQLSAAIKRTVEDGFARVRVRGELSGT
KRAASGHFYAALKDDNALIDMVMWKGQAGRLAFRPEDGIEVIATGKLTTYPGRSKYQLVV
DTLEVAGEGALMLLFEKLKARLGAEGLFDRERKYDRLPYLPRTIGVVTSPTGAVIRDILH
RLADRCPTHVIVWPVLVQGDGAAAQVANAIRGFDAIDPGGRVPRPDLVIVARGGGSIEDL
WAFNEEVVVRAIADCRIPTISAVGHETDVTLADYAADVRAPTPTAAAEMAVPVRAELISQ
LATWNGRIIGAANRHQALAGERLTALARHLPKRDALYAPQRQRLDDAGDRLDRSQRHRLT
VISERLATRGAAMRPALLARRWDRDRALLEGLGRLLDSLDPRALLSRGYAMVRDAGGAIV
TTAAKARGAGHLQLQFADGEVPVAVGAGDGAPPPTPTPKPVRKPSPAEPKRGQGELF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcccttttcccgatacggcgtccgacgatggcaccgaagcgcggctgttagcc
gaggcttcgccgggggacaatgcaccagccctgtcggtcagccaattatcggcggcgatc
aagcggacggtcgaggatggctttgcgcgcgtgcgcgtgcggggtgagttgtcggggacc
aagcgtgcggcatcggggcatttctacgcggcgctgaaagacgataatgcgctgatcgac
atggtgatgtggaaggggcaggcgggtcgcctcgcctttcggcccgaggacgggatcgag
gtgatcgccacaggcaagctcacgacctatccgggccgctccaaatatcagcttgtcgtc
gatacgctcgaggttgcgggcgaaggcgcgctgatgctgctcttcgagaaattgaaggcg
cggcttggcgccgaggggctgttcgaccgcgagcgaaaatatgatcggctgccctatctg
ccgcgaacgatcggggtcgtgacctcaccgaccggggcggtgatccgcgatatccttcac
cggctcgccgaccgttgccccacgcatgtcatcgtctggccggtgttggtgcagggcgac
ggcgcggcggcccaggtcgcaaatgcgatccgcggcttcgatgcgattgacccgggcggg
cgagtgccgcgccccgacctcgtcatcgttgcgcgcggcggcgggtcgatcgaggatctg
tgggcgttcaatgaagaggtcgtcgtgcgcgcgatcgccgattgccgcattccgacgatc
agcgcggtggggcacgagaccgacgtgacgctcgccgactatgccgccgacgtccgcgcg
ccgaccccgaccgcggcggccgagatggcggtcccggtgcgcgccgaactcatctcgcag
ctcgcgacctggaacgggcggattatcggcgcggcgaaccggcatcaggcgctggcgggc
gagcggctcacggcgctggcgcggcatttgccgaagcgcgacgcgctttatgcgccgcag
cgccagcggctcgacgatgcgggcgaccggctcgaccgcagccagcgccaccggctgacg
gtgatttcggaacggctcgcgacgcgcggtgccgcgatgcggcccgcgctgctggcgcgg
cgttgggatcgtgaccgggcgctgctcgaagggctggggcggctgctcgacagccttgac
ccccgcgcgttgctgtcgcgcggctatgcgatggtgcgcgatgcgggcggtgcgatcgtg
accaccgcggccaaggcgcgcggcgccgggcatttgcagctccaattcgctgacggcgag
gtgccggtcgctgtcggtgcgggcgatggcgcgccgccgcccacgcccacgcccaagccg
gtgcgcaagccttcgccggcggagcccaaacgggggcagggcgagctcttctga
DBGET
integrated database retrieval system
