Sphingopyxis sp. USTB-05: KEC45_20180
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Entry
KEC45_20180 CDS
T10625
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
spus Sphingopyxis sp. USTB-05
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
spus03110
]
KEC45_20180 (clpB)
Chaperones and folding catalysts [BR:
spus03110
]
Heat shock proteins
HSP100
KEC45_20180 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
RuvB_N
Mg_chelatase
IstB_IS21
AAA_7
TniB
AAA_25
AAA_24
bpMoxR
NACHT
NBD_SMAX1
T2SSE
DNA_pol3_delta2
TMCO5
Motif
Other DBs
NCBI-ProteinID:
USI77021
LinkDB
All DBs
Position
complement(4347596..4350175)
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AA seq
859 aa
AA seq
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MNLEKFTDRAKGFLQAAQTIAIRMNHQRISPEHIAKALLEDNEGMAAGLIAKSGGDAARA
VAGIDALLAKVPAVSGSGAQQTPGLDNDAVRLLDQAEQVASKAGDGYITVERLLLAMVVS
AGTPVGKAFADAGVKADALNTAINDLRGGRTADTASAEDRYEALKKFARDLTEVAREGKL
DPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGLALRITNGDVPDSLKDRRL
LSLDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGKGEGAMDASN
LLKPALARGELHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDSISILRGLKEKY
ELHHGVRITDGAIVAAATLSNRYISDRFLPDKAIDLMDEAASRIRMEVESKPEEIETLDR
RIIQMKIEESALGKESDAASKDRLASLQAELANLEQQSAGLTQKWQAEKDKIHAEAKIKE
ELDAARSALDQAQRAGDLAKAGELSYGTIPGLEKRLEEAQAAAGNAMLREEVTADDIAAV
VSKWTGIPVDRMMEGEREKLLGMESTLEQRVIGQDEAVRAVSTAVRRARAGLQDPNRPLG
SFLFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEG
GTLTEAVRRRPYQVVLFDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFTNTLIILTSN
LGSQAIAALPDDAPVEQAEPAVMEVVRAHFRPEFLNRLDEIVLFNRLAQQHMGGIVDIQV
ARVQKLLADRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQKYLQDPLADLILKGEVK
DGSTIKVDEGDGALKLAPA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaaaaatttaccgaccgcgccaagggctttttgcaagcggcgcagacgatc
gcgatccgcatgaaccatcagcggatttcgcccgagcatatcgccaaggcgctgctcgaa
gacaatgaaggcatggccgcgggcctgatcgccaagagcggcggcgacgccgcgcgcgcg
gttgccggcatcgacgcgctgctcgccaaggttcccgccgtgtcgggttcgggcgcgcag
cagacgccgggcctggacaatgacgccgtgcgcctgctcgatcaggccgaacaggtcgcg
tcgaaggcgggcgacggctatattaccgtcgaacggctgctgctcgcgatggtagtttcg
gcgggcaccccggtcggcaaagcctttgccgatgccggcgtgaaggccgatgcgctgaat
accgcgatcaacgatctgcgcggcggccgcaccgccgacacggcctcggccgaagaccgc
tatgaagcgctcaagaaatttgcccgcgacctcaccgaagtcgcccgcgaaggcaagctc
gatccggtcatcggccgcgacgaggaaatccgccgcacgatccagatccttgcgcgccgg
accaagaataatccggtgctgatcggcgagcccggcgtcggcaagaccgcgatcgccgag
ggcctagccctgcgcataaccaatggcgacgtccccgacagcctgaaggaccgccgcctg
ctgtcgctcgacatgggcgcgctgatcgcgggcgccaaatatcgcggcgagttcgaggag
cggctgaagggcgtgctcgacgatgtgaaggccgccgagggcgagatcatcctgttcatc
gacgagatgcacacgctcgtcggcgcgggcaagggcgagggcgcgatggatgcctcgaac
ctgttgaagcccgcgctcgcgcgcggcgaactccactgtatcggcgcgaccacgctcgac
gaatatcgcaagcatgtcgaaaaagaccccgcgcttcagcggcgcttccagccggtgttc
gtcggcgagccgacggtcgaggattcgatctcgatcctgcgcgggctcaaggagaaatat
gagctgcaccatggcgtgcggatcaccgacggcgcgatcgttgccgccgcgacgctgtcg
aaccgctatatctccgatcgcttcctgcccgacaaggcgatcgacctgatggacgaggcg
gcgagccgcatccgtatggaagtggaatcgaagcccgaggaaatcgaaacgctcgaccgc
cgcatcatccagatgaagatcgaggaatcggcgctcggcaaggaaagcgacgccgcgtcg
aaggaccggctggcgagtttgcaggccgagcttgcaaaccttgagcagcagtcggcgggg
ctcacccagaaatggcaggccgaaaaggacaagatccacgccgaggcgaagatcaaggaa
gagctcgacgccgcgcgttcggcgctcgatcaggcgcagcgcgccggcgatctcgcgaag
gcgggcgagctatcttatggcaccatccccggcctcgaaaaacggctggaggaagcgcag
gcggccgcgggcaatgcgatgctgcgcgaggaagtgaccgccgacgatatcgccgcggtc
gtgagcaaatggaccggcatccccgtcgaccgcatgatggaaggcgagcgcgagaagttg
ctcggcatggagagcacgctcgagcagcgcgtcatcggccaggacgaagccgtccgcgcc
gtctcgaccgcggtccgccgcgcccgcgcggggcttcaggacccgaaccgcccactcggc
agcttcctcttcctcggccccacgggcgtcggcaagaccgaactcaccaaggcgctcgcg
cgcttcctgttcgacgacgacaatgcgatggtccgcatcgacatgtccgaattcatggaa
aagcacagcgtcgcgcgcctcgtcggcgcgcctccgggctatgtcggttatgaggagggc
ggtacgctcaccgaggcggtgcgccgccgcccctatcaggtcgtgctgttcgacgaggtc
gaaaaggcccacgccgacgtgttcaacatcctgttgcaggtgctcgacgacgggcgcctt
accgacgggcagggacgcacggtcgacttcaccaacacgctgatcatcctgacctcgaac
cttggcagccaggcgatcgccgcgcttcccgacgacgccccggtcgaacaggccgagcct
gcggtcatggaagtcgttcgcgcgcatttccggcccgagttcctgaacaggctcgacgag
atcgtactcttcaatcgcctcgcgcagcagcatatgggcggcatcgtcgacatccaggtc
gcgcgtgtccaaaagctgctcgccgaccgcaaggtgacgctcgacctgaccgacgccgcg
cgcgcctggcttgggcgtgtcggttatgatccggtctatggcgcgcggccgctgaaacgc
gcggtgcagaaatatctgcaggatccgcttgccgatctgatcctgaaaggcgaagtgaag
gacggatcgacgatcaaggtcgacgaaggcgacggcgcgctgaaactcgcgccagcatag
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