Sphingopyxis sp. USTB-05: KEC45_20265
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Entry
KEC45_20265 CDS
T10625
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spus Sphingopyxis sp. USTB-05
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spus03016
]
KEC45_20265
Enzymes [BR:
spus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KEC45_20265
Transfer RNA biogenesis [BR:
spus03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KEC45_20265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
USI77038
LinkDB
All DBs
Position
complement(4364822..4365406)
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AA seq
194 aa
AA seq
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MNAMFRYFLGFQVAADRAGWLARQLPPVSGDLFAGLKPQNYHLTLCTIDETSAQHPFLRQ
RVANAFEAGLPAASPIPFGRIVSKDAGAELVTAGSIAGIRQLYETLVALLAPHGIEPLYR
QSGLRPHITLGYGRHPFDPVPLAWNWTPRDLVLIESHVGHSRHRVLQRWQLPAPAQGAFA
FMEDELPPALRYAA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatgttccgttattttctggggtttcaggttgccgcggaccgcgccggctgg
ctcgcgcgccagttgccgcctgtttcgggcgacctgttcgcgggcttgaagccgcagaac
tatcatctcacgctgtgcacgatcgacgagacgtcggcccagcacccctttctgcgtcag
cgggtcgccaatgcgttcgaagcgggcctgcccgctgccagccccattcccttcggccgt
atcgtcagcaaggacgcaggggccgaactcgtcacggccggcagcattgccggaattcgt
cagctatacgaaacgctcgtcgccttgctcgcaccgcatgggatcgagccattgtatcgc
caatcggggctccgcccgcacatcacgctcggctatggccgacatccgttcgatccggtt
ccgctcgcgtggaactggacgccccgcgacctcgtcctcatcgaaagccacgtcggccac
agccggcaccgcgtcctgcaacgctggcaactgcccgcgcccgcacagggcgcctttgcc
ttcatggaagacgaactgcccccagcgctacgttacgccgcctag
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