Streptococcus pneumoniae Hungary19A 6 (serotype 19A): SPH_1161
Help
Entry
SPH_1161 CDS
T00658
Name
(GenBank) RNA polymerase sigma factor RpoD (Sigma-A) (Sigma-43)
KO
K03086
RNA polymerase primary sigma factor
Organism
spv
Streptococcus pneumoniae Hungary19A 6 (serotype 19A)
Pathway
spv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPH_1161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spv03021
]
SPH_1161
Transcription machinery [BR:
spv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPH_1161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
ACA36748
UniProt:
B1IBL3
LinkDB
All DBs
Position
1068801..1069910
Genome browser
AA seq
369 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGI
SITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
ALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
DEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacaaaaagaagtaacaacatttgacgtacaggtagcagaatttatccgt
aatcataagcaaaaagggacagcaacagatgatgaaatcaatgcaagtctggttattcct
tttaccttggacgctgatgggattgaagatctcttgcaacggattcaggatgcaggcatt
tctatcacagataacgaaggaaatccaagtgcgcgtgttcttagcaatgaagaagaacca
gaactcagcgatgaggacttgattgggtcaacttctgctaaggtcaatgaccctgtccgt
atgtacttgaaagaaataggggtcgttcctctcttgaccaatgaagaggagaaagagttg
gcactggctgttgaagctggcgatatcgaagccaaacaacgtcttgcggaagccaatctt
cgtttggttgtttccattgccaaacgctatgtcggtcgtggcatgcagttccttgacttg
attcaagaaggaaatatgggcttgatgaaggcggttgacaagtttgactattctaaaggg
ttcaagttttcaacttatgcaacttggtggattcgtcaggctatcactcgtgctattgca
gaccaagctcgtaccatccgtatcccagttcacatggttgaaactatcaataaattggtt
cgtgaacagcggaatctccttcaagaattggggcaagatccgacaccagaacagattgct
gaacgaatggatatgacacctgataaggttcgtgaaatcttgaagattgcccaagaacca
gtatctcttgaaactcctatcggtgaagaggacgatagccaccttggagactttatcgaa
gatgaagtgattgaaaatccagtggattatacgactcgtatcgtcttgcgtgagcaattg
gatgaaatcttagatactcttacagaccgtgaagaaaatgttctgcgtctacgttttgga
ctagatgatggaaaaatgcgcacacttgaagatgtggggaaagtctttaacgtaactcgt
gagcgtatccgtcagattgaagcaaaggctttgagaaaactacgccaaccaagtcgtagc
aaaccgcttcgtgattttattgaagactaa
DBGET
integrated database retrieval system
