Streptococcus pneumoniae Hungary19A 6 (serotype 19A): SPH_2101
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Entry
SPH_2101 CDS
T00658
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spv
Streptococcus pneumoniae Hungary19A 6 (serotype 19A)
Pathway
spv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPH_2101 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spv03021
]
SPH_2101 (rpoC)
03400 DNA repair and recombination proteins [BR:
spv03400
]
SPH_2101 (rpoC)
Enzymes [BR:
spv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPH_2101 (rpoC)
Transcription machinery [BR:
spv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SPH_2101 (rpoC)
DNA repair and recombination proteins [BR:
spv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SPH_2101 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Dehydratase_LU
Motif
Other DBs
NCBI-ProteinID:
ACA36707
UniProt:
B1I8R3
LinkDB
All DBs
Position
complement(1935232..1938909)
Genome browser
AA seq
1225 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYRGIVCDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLL
KQVDLEKEIAELKEELKTATGQKRVKAIRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMAYRNGYVHLHSRVGI
ATDSLNKPWTEEQRHKVLLTTVGKILFNDIMPEGLPYLQEPNNANLTEGVPAKYFLPLGG
DIKEAISNLELNPPFKKKNLGNIIAEIFKRFRTTETSALLDRMKNLGYHHSTLAGLTVGI
ADIPVVDDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLIANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSIAEGKEMIESLE
ERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRVEVGGQV
ARGAALTEGSIQPKRLLAVRDVLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDINDFTDANKDVLIAGGVPATGRPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPHAVNEEEYLNPPV
EEEGNEETTEVVVDTAVETVEETVE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgttttaaaagtatgcaaatcaccctagcttctccaagtaaagtc
cgttcatggtcttatggagaagtcaaaaaacctgaaacaatcaattaccgtaccttgaaa
ccagaacgtgaaggactctttgatgaagtgatctttggtcctacaaaagactgggaatgt
gcttgtggtaagtacaaacgcattcgttacagaggaattgtttgtgaccgctgtggggtt
gaagtaacgcgtacgaaagttcgtcgtgagcgtatgggacatatcgaattgaaagctcct
gtatctcacatctggtacttcaaggggattccaagccgtatgggcttgacccttgatatg
agccctcgtgccctcgaggaagttatctactttgcggcttatgtggtgattgatcctaag
gatacaccacttgagcacaagtctatcatgacagagcgcgaataccgagagcgcttgcgt
gaatatggttatggttcatttgttgccaagatgggtgcggaagccatccaagaccttttg
aagcaagtagatcttgaaaaagaaattgctgaactcaaagaagaattgaaaacagctact
ggacaaaaacgtgtcaaagccatccgtcgtttggatgttttggatgccttttacaagtct
ggaaacaaacctgaatggatgattcttaacatccttccggttattccaccagatcttcgt
ccaatgttgcagttggatggtggccgttttgcctcatctgacttgaatgacctttaccgc
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgagttaaatgcaccaggtatc
atcgttcaaaatgagaagcgtatgcttcaagaagcagttgacgctttgattgacaatggt
cgccgtggtcgtccaatcacaggaccaggtagccgtccattgaaatcattgagccacatg
cttaaaggtaaacaaggacgcttccgtcaaaacttgctcggtaaacgtgttgacttttca
ggacgttccgttatcgctgttggtccaactcttaagatgtaccaatgtggtgtgccacgt
gaaatggcgattgaactctttaaaccatttgtcatgcgtgaaatcgttgcccgtgatatc
gtgcaaaacgtcaaagcagctaaacgcttggtggaacgcggagatgagcgtatctgggat
atccttgaagaagtgattaaagaacacccagtgcttttgaaccgcgcaccgacccttcac
cgtttgggtatccaagccttcgagccagtcttgattgatggtaaggctcttcgcttgcac
ccacttgtctgtgaagcctacaatgctgactttgacggggaccaaatggccatccacgta
ccactttcagaagaagcacaagcagaagctcgtatcctcatgctagctgctgagcacatc
ttgaacccgaaagatgggaaaccggtagttactccatctcaggacatggttttgggtaac
tactacttgaccatggaagaagctggtcgcgaaggtgaaggaatggtcttcaaagaccgt
gacgaagcggttatggcttaccgcaatggctatgttcacctccactcacgtgttggtatc
gcaacagacagcctcaacaagccttggacagaagagcaaagacataaggtcttgcttaca
acagttggtaaaattctcttcaacgatatcatgccagaggggctaccatacttgcaagaa
ccaaacaatgccaacttgacagaaggtgttccagctaaatacttcttgccacttggtgga
gatatcaaggaagctatcagcaatcttgagctcaaccctccattcaagaaaaaaaacctt
ggaaatatcatcgctgaaatcttcaaacgtttccgtacgacagaaacttctgccctactt
gaccgcatgaagaatctcggttaccaccactcaactcttgcaggattgacagtgggtatt
gccgacatcccagtcgttgatgacaaggctgaaatcattgaagaatcacacaaacgtgtc
gaacaaatcaccaaacaattccgtcgtggtatgatcacagacgacgagcgttacaatgct
gttacagctgaatggcgtgctgcccgtgaaaaacttgagaaacgcttgattgctaaccaa
gatcctaagaacccaatcgttatgatgatggactctggagcccgtggtaacatctcaaac
ttctcacagcttgccggtatgcgtggtctgatggctgctccgaatggacgtatcatggaa
ttgccaattctttcaaacttccgcgaaggtttgtcggtattggaaatgttcttctcaact
cacggtgctcgtaaaggtatgaccgatacggcccttaagacagccgactcaggttacttg
actcgtcgtttggtcgacgttgcccaagacgttatcatccgtgaggacgactgtggaact
gaccgtggtctcttgatccgttctatcgcagaaggaaaagagatgatcgagtctctcgaa
gagcgtctcaacggtcgttacactaagaaaactgttaaacatccagaaactggtgcagtg
attattggtccaaatgaattgattacagaagacaaggcgcgtgaaattgtcaatgctggt
gtggaagaagtgactatccgttctgtatttacatgtaacactcgtcacggtgtctgccgt
cactgttatggtatcaacttggcgactggtgatgcggttgaagttggtgaagcagttggt
acaatcgctgcccaatctatcggggaacctggtacacagcttacaatgcgtaccttccac
acaggtggggttgcctcaaataccgatatcactcagggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatcctaaaggggaagcggttatcacagaggttaaaggacaagttact
gctatcgaagaagatgcatcaactcgtaccaagaaagtctttgttaagggtgaaactggc
gaaggtgaatatgtcgttccatttacagctcgtatgcgtgtcgaagttgggggccaagta
gcgcgtggtgctgctctgacagaaggttctatccaaccaaaacgtctccttgcagttcgt
gatgtcttgtcagttgaaacgtaccttctcggtgaagtacaaaaagtttatcgtagccaa
ggggtagaaatcggtgacaaacacatcgaggtaatggttcgtcaaatgatccgtaaagtc
cgtgtcatggatccaggtgatacagatcttctcatgggtaccctcatggatatcaatgac
tttacagatgccaacaaagatgtccttatcgcaggtggagttccagcgacaggtcgccca
gtccttatgggaattaccaaagcctcacttgaaacaaacagtttcttgtcagcggcttcc
ttccaggaaacaactcgtgtccttactgacgcagctatccgtggtaagaaagaccatctc
cttggacttaaagaaaatgttatcatcggtaagatcatcccagctggtactggtatggcc
cgttaccgtaaccttgaaccacatgctgtcaacgaagaagaataccttaatcctccagta
gaggaagaaggaaatgaagaaacaacagaagtagttgtggatactgccgttgaaactgtg
gaagaaacagtagaataa
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integrated database retrieval system
