Streptococcus pneumoniae CGSP14 (serotype 14): SPCG_1943
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Entry
SPCG_1943 CDS
T00690
Symbol
cbf1
Name
(GenBank) cmp-binding-factor 1
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spw
Streptococcus pneumoniae CGSP14 (serotype 14)
Brite
KEGG Orthology (KO) [BR:
spw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spw03019
]
SPCG_1943 (cbf1)
Messenger RNA biogenesis [BR:
spw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPCG_1943 (cbf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ACB91196
LinkDB
All DBs
Position
complement(1927629..1928633)
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AA seq
334 aa
AA seq
DB search
MSCQKVSLRLIYSIFKKMRKNMKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQD
DSGEIDGKLWDAQPHNIEAFTAGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADF
KVKSPVDVKEIRDYMSQMIFKIENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLA
YHTATMVRLADAISEVYPQLNKSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIAL
IDSEITKTVMELGIDDTKEEVVLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDAS
MMMMSTALALVDKGEMSNKIFAMDNRSFYKPDLD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgagttgtcagaaggtgagcctgcgcttgatctactctattttcaagaaaatgaggaag
aatatgaagattagtcacatgaaaaaagatgagttatttgaaggcttttacctaatcaaa
tcagctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagat
gatagtggcgagattgatgggaagctctgggatgcccaacctcataacattgaggccttt
accgcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaatacccctcaa
gtcaatcaaattactctccgcctgcctcaagctggtgaacccaatgacccagctgatttc
aaggtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaaatgattttc
aaaattgaaaatcctgtctggcaacggattgtccgaaatctctacaccaagtatgataag
gaattctactcctatccagccgccaagaccaaccaccatgcctttgaaacgggcttggct
tatcatacggcgaccatggtacgtttggcagacgctattagcgaagtttatcctcagctc
aataagagcttactctatgcggggattatgctgcatgacttagctaaggttatcgagttg
acggggccagaccagacagagtacacagtgcgaggtaatcttcttggacatatcgctctc
attgatagcgaaattaccaagacagttatggaactcggcatcgatgataccaaggaagaa
gtcgttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatatggaagtcca
gtccgtccacgtattatggaggcagagattatccatatgattgacaatctggatgcaagc
atgatgatgatgtcaacagctctggctttggtggataaaggagagatgtccaataaaatc
ttcgctatggataatcgttccttctataaaccagatttagattga
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