Sphingobium sp. WTD-1: N6H05_02080
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Entry
N6H05_02080 CDS
T10837
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_02080
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_02080
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WIA56638
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Position
complement(390153..392108)
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AA seq
651 aa
AA seq
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MFKYLTFCSFLLSTTAFAEEAQQAPPPDAAADAGASSILVTATRLATPVDQVPASVTVLD
KAAIDRAQDLGVTELLLRTPGVSISRNGGYGTATSLRIRGAESDQTVVVIDGVKLNDPSS
AGGGYNFANLLAGDASRIEVLRGPQSTLWGSQAIGGVVNVVTAMPEKALEGSFDIEAGSR
DTVSARAALGGKTGPVSWRIGGQSFTTEGISAISPAFGGKEKDGYTNRSVTGRVEVALAD
GISADLRGYYSDGRVDFDATSADSPAYGTNREFVGYAGLNVALFDGRFRNRFGYGYTDTD
RDNYDPRNPRKQTFDAAGRNQRLEYQGSFAIADGWTALFGVENENSRFRSVSPSASLSVP
IPDPARGKAEITSVYGQLNAQPITGLTLTGGLRYDDHNRYGGRTLFSAGGVWALPTGTVL
RASYGEGFKAPTLYQLFSEYGNQALDPERAHGWEAGAEQRFFGEKLRLGATWFDRTTTDQ
IIYNSCSSSSTDPLCFTPGTTTRRYGYYLNVARAKAHGIEAQVAVEPVKGLTIDGNYSWT
VAEDRSEGTANEGNWLPRRPRNSANGAISYAWPFGLTTGAALRWSGHSYDNAANTTRLDD
YTLVDLRAEYAFTPALRLFARVENLFDENYMTAYRYGTLGRSIYAGFRGRF
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatatctgactttctgttctttccttctctccaccaccgctttcgccgaagag
gcgcagcaggcgccaccgcccgatgccgccgccgatgccggcgcatcctcgatcctcgtc
accgcgacccgcctcgccacgccggtcgatcaggtgccggcctccgtcaccgtgctcgac
aaggcagcgatcgaccgagcacaggatctgggcgtcaccgaattgctgctgcgcacgccc
ggagtcagcatctcgcgcaatggcggctatggcacggcgacgtcgctgcgcatccgcggc
gcggaatccgaccagaccgtggtggtgatcgacggcgtgaagctcaacgatccctcttcg
gccggcggcggctataatttcgcaaacctgctggccggcgatgcctcgcgcatagaagtg
ctgcgcggtccccagtcgaccctgtggggcagccaggcgatcggcggcgtcgtcaatgtc
gtcaccgccatgcccgaaaaggcgctggagggcagcttcgacatcgaggcggggtcgcgc
gacacggtcagcgcccgcgcggcgctgggcggcaagacggggcctgtcagctggcggatt
ggcggccagagtttcaccaccgagggcatttcggcgatcagcccggcctttggcggcaag
gagaaggacggctacaccaaccgcagcgtcaccggccgggtcgaggttgcgctggcggat
gggatcagcgcggacctgcgcggttattattccgatggccgtgtcgatttcgacgcgacc
agcgcggacagtccggcctatggcactaatcgcgaatttgtcggctatgccggcctcaat
gtggcgctgttcgatggccggttccgcaaccgtttcggctatggttataccgacaccgat
cgcgacaattacgacccgcgcaacccgcgcaagcagacgttcgacgcagccgggcgcaac
cagcggctggaatatcagggcagcttcgcgatcgccgacggctggaccgcgctgttcggg
gtggagaatgagaatagccgcttccgcagcgtgtcgccttcggcgtcgctttcggtcccg
attcccgatccggcccgcggcaaggcggagatcaccagcgtctatggccagctcaatgcc
cagccgattacgggcctgaccctgaccggcgggctgcgctatgacgatcataaccgctac
ggcggccgcaccctcttttccgccggtggcgtctgggcgctgccgaccgggacggtgctg
cgcgccagctatggcgaggggttcaaggcgccgaccctctatcagctcttttccgaatat
gggaaccaggcgcttgatcccgaacgcgcccatggctgggaagctggcgcggagcagcgt
ttctttggcgagaaactgcgactgggcgcgacctggttcgatcggaccacgaccgaccag
atcatctataacagctgttcgtccagctcgaccgatccgctctgcttcacgcccggcacc
accacccgccgctatggctattatctcaatgtcgcgcgcgccaaggcgcatggcatagag
gcgcaggtggcggtcgaaccggtcaaggggctgaccatcgacggcaattatagctggacc
gtggcggaggatcgttcggaagggaccgcgaacgaaggcaattggctgccgcgccggccg
cgcaacagcgccaatggcgcgatcagctatgcctggcccttcggcctcaccaccggcgcg
gcgctgcgctggtccggccacagctatgacaatgcggccaacacgacgcggctggacgat
tatacgctggtcgacctgcgcgccgaatatgcgttcaccccggcgttgcgcctgttcgct
cgcgtcgaaaatctcttcgacgagaattatatgacggcctatcgctatggcacgctcggc
cggagcatctatgccggcttccgggggcgcttctga
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