Sphingobium sp. WTD-1: N6H05_03790
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Entry
N6H05_03790 CDS
T10837
Symbol
rhmD
Name
(GenBank) L-rhamnonate dehydratase
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00051
Fructose and mannose metabolism
spwt01100
Metabolic pathways
spwt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
N6H05_03790 (rhmD)
Enzymes [BR:
spwt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
N6H05_03790 (rhmD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
WIA56946
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Position
complement(742328..743548)
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AA seq
406 aa
AA seq
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MGLAQGSFSVPIVTLPKIKHVRAFTVRGGGADYHDQGEGHWIDDHIATPMSKYPEYRQSR
QSFGINVLGTLVVEIEAEDGTIGFAVTTGGEPAAYIVEKHLARFLEGRSPTDYEKIWDQM
YFSTQYYGRKGLVINAISGVDLALWDLLGKLRQEPVYHLLGGAVRDELQFYATGARPDKA
KEFGFIGGKMALHHGPAEGIEGLKKNIAELADMRSKVGDDFWLMWDCWMALDVDYATRLA
IAAHELGLKWIEEAISPDDYWGYQQLKRNVPKGMLVTTGEHEATRWGFRMLMEMDCCDII
QPDVGWCGGVTELLKISALADAHGKMVVPHGSSVYSYHFVITRHNSPFAEFLMMHPGPTE
VVPMFHPQLLGEPVPENGRMKVTALDKPGFGVDLNPDIAMHRPYTH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggtctggcccaagggagtttcagcgtgcccatcgtgacgttgccgaagatcaagcat
gtccgcgccttcaccgtgcgcggcggcggtgccgattatcatgaccagggcgaaggccac
tggatcgacgatcacatcgcgacgccgatgtcgaaatatcccgaatatcgccagtcgcgg
cagagcttcggcatcaatgtgctcggcaccttggtggtggagatcgaggcggaggacggc
accatcggtttcgccgtgacgaccggtggcgagcccgccgcctatatcgtcgaaaagcat
ctcgcccgtttcctcgaaggccggtcgccgaccgactatgagaagatctgggaccagatg
tatttctcgacccaatattatggccgcaagggcctggtcatcaacgccatctccggcgtc
gaccttgcgctctgggatctgctcggcaagctgcgccaggaaccggtctatcatctgctc
ggtggcgccgtgcgcgacgaactgcaattctacgccaccggcgcgcgcccggacaaggcg
aaggaattcggcttcatcggcggcaagatggcgctgcaccacggcccggccgaaggcatt
gagggcctgaagaagaatatcgccgaactggccgacatgcgctcgaaggtcggcgatgat
ttctggctgatgtgggactgctggatggcgctagacgtcgactatgccacccgcctcgcc
atcgccgcgcatgagctgggtctcaagtggatcgaggaagcgatcagcccggacgattat
tggggctaccagcagctcaagcgcaacgtgcccaagggcatgctggtcaccaccggcgag
catgaagcgacccgctggggcttccgcatgctgatggaaatggattgctgcgacatcatc
cagcccgacgtcggctggtgcggcggcgtgaccgaactgctcaagatcagcgcgctggcc
gacgcccatggcaagatggtcgtgccgcatggctcgtcggtctacagctatcatttcgtc
atcacccgccacaactcgcccttcgccgagttcctgatgatgcatccggggccgacggag
gtggtgccgatgttccacccgcaattgctgggtgaaccggtgccggaaaatggccgcatg
aaggtgaccgcgctcgacaagccgggcttcggcgtcgacctcaaccccgatatcgcgatg
caccgtccctatacccactga
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