Sphingobium sp. WTD-1: N6H05_04135
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Entry
N6H05_04135 CDS
T10837
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spwt03032
]
N6H05_04135
03036 Chromosome and associated proteins [BR:
spwt03036
]
N6H05_04135
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_04135
DNA replication proteins [BR:
spwt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N6H05_04135
Chromosome and associated proteins [BR:
spwt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
N6H05_04135
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
N6H05_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_cement_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WIA57011
LinkDB
All DBs
Position
817796..818071
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLADSLASANNITKADARKLVDGVFAAIADAAAKGEEVSLNGFGKFKVKDTPAREG
RNPSTGATIQIAAAKKLTFTPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagcgacctcgccgacagcctggcttcggccaacaacatcaccaaggccgat
gctcgcaagctggtcgatggcgtgttcgccgcgatcgccgatgctgccgcgaagggcgaa
gaagtttcgctcaacggcttcggcaagttcaaggtcaaggacacgcccgcccgcgaaggc
cgcaacccttcgaccggtgcgaccatccagatcgctgccgccaagaagctgaccttcacc
cccgccaaggcggtcaaggacaagctgaacggctga
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