Sphingobium sp. WTD-1: N6H05_06070
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Entry
N6H05_06070 CDS
T10837
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N6H05_06070 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spwt01007
]
N6H05_06070 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spwt03016
]
N6H05_06070 (aspS)
03029 Mitochondrial biogenesis [BR:
spwt03029
]
N6H05_06070 (aspS)
Enzymes [BR:
spwt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
N6H05_06070 (aspS)
Amino acid related enzymes [BR:
spwt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
N6H05_06070 (aspS)
Transfer RNA biogenesis [BR:
spwt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
N6H05_06070 (aspS)
Prokaryotic type
Other AARSs
N6H05_06070 (aspS)
Mitochondrial biogenesis [BR:
spwt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
N6H05_06070 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
WIA57360
LinkDB
All DBs
Position
1223064..1224848
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AA seq
594 aa
AA seq
DB search
MHAYRTHTCGALREADVGATVRLSGWVHRKRDHGGVLFIDLRDHYGLTQIVAKADSEPLR
ILDGLRAESVVTIDGTVVARGPEATNPKMATGTIEVVADSVTVQSTAAELPLPVAGEQEY
PEDIRLRYRFLDLRRETLHANIVTRTKIIRDMRRRMEDVGFTEYSTPILTASSPEGARDF
LVPSRIHAGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEDVWNTMEPVIASVFEEFAQGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPII
IQDVTEHFHGSGFGIFASLVESGNVIRAIPAPGAGAGSRKFFDDMNNWARGEGYSGLGYI
NIKDGVPGGPIAKNHGEEATAKLIEALGLGPNDGVFFAAGKESQAAKLAGLARIRVGETL
DLIDKDRFDLCWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGLDALNNQDPLSLKAYQYDM
VCNGFEIASGSIRNQSPEAMVKAFELVGLSQADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSAAEFKQLRELHVRVVEPQAKA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgcacccacacctgcggcgcccttcgtgaagccgatgtcggcgcgacc
gttcgcctgtccggctgggtacatcgcaagcgcgatcatggcggcgttctcttcatcgac
ctgcgcgaccattatggcctgacccagatcgtcgccaaggcggacagcgagccgctgcgc
atcctggacggcctgcgcgcggaatcggttgtgacgatcgacggcaccgtcgtcgcgcgc
ggcccggaagcgaccaacccgaagatggcgaccggcacgatcgaggtcgtggccgatagc
gtgaccgttcagtcgaccgccgccgaactgccgctgccagtggcgggcgagcaggaatat
cccgaggatattcgcctgcgctatcgcttcctggacctgcgccgcgagacgttgcacgcc
aatatcgtgacgcgcaccaagatcatccgcgacatgcgccgccgcatggaagatgttggc
ttcaccgaatattcgacgccgatcctgaccgcgtcatcgcccgaaggcgcgcgcgacttc
ctggtgcccagccgcatccatgccggcaaattctacgccctgccgcaggcgccgcagcaa
tataagcagttgctgatggtcgccggcttcgaccgctatttccagatcgcgccctgcttc
cgcgatgaagatccgcgcgccgaccgcctgccgggcgagttctaccagcttgacctggaa
atgagcttcgtcacccaggaagatgtctggaacacgatggagccggtcattgcgtcggtg
ttcgaggaatttgcgcagggcaagccggtcaccccggccggcagcttcccgcgcattccg
cacgccgaagccatgctgaaatatggcagcgacaagccggacctgcgcaacccgatcatc
atccaggacgtgaccgaacatttccacggctcgggcttcggcatcttcgccagcctggtc
gagagcggcaatgtcatccgcgccattccggcgccgggtgcaggcgcgggcagccgcaaa
ttcttcgacgacatgaacaattgggcgcgcggcgaaggctattcgggccttggctatatc
aacatcaaggatggcgtgcccggtggcccgatcgccaagaatcatggcgaggaagcgacc
gccaagctgatcgaggcgttggggcttggtccgaatgacggcgtgttcttcgccgctggc
aaggaatcgcaggcggcgaagctggcgggtctggcgcgcattcgcgtcggcgagacgctc
gacctgatcgacaaggatcggttcgacctgtgctggatcgtagacttccccttctatgaa
tatgacgaagacgagaagaagatcgacttcgctcacaatcccttctcgatgccgcagggc
gggctggacgcgctcaacaaccaggacccgctgagcctcaaggcctatcagtatgacatg
gtctgcaacggctttgagatcgcgtcgggttcgatccgtaaccagtcgcccgaagcgatg
gtgaaggcgttcgagctggtgggcctcagccaggcggatgtggaagagcggttcggtggc
ctctatcgcgcgttccagtacggcgcgccgccccatggtggcatggccgccggcgtcgac
cgcatcgtgatgctgctgtgcggcgcgcagaatctgcgcgagatcacgctgttcccgatg
aaccagcgcgccgaagacctgttgatgggggcgcccagcgccgccgagttcaagcagctg
cgcgaactgcatgtccgtgtcgtggagccgcaggcgaaggcataa
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