Sphingobium sp. WTD-1: N6H05_08265
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Entry
N6H05_08265 CDS
T10837
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00362
Benzoate degradation
spwt00624
Polycyclic aromatic hydrocarbon degradation
spwt01100
Metabolic pathways
spwt01120
Microbial metabolism in diverse environments
spwt01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N6H05_08265 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
N6H05_08265 (pcaH)
Enzymes [BR:
spwt01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
N6H05_08265 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
WIA57777
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All DBs
Position
1676918..1677631
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AA seq
237 aa
AA seq
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MTTDIAYAPDDAGLPPLLYPEYRSTGLRSPRHPLVNAPQTLTEVSGPSGCWSALMGQAEV
DLTSQHGSAPHGQRIRISGRVLDDSGRPVPNTIVEIWQANAAGRYIHRNDNWDAPLDPNF
TGAGRVITDDQGWYSFTTIRPGAYPWGNHHNAWRPAHIHLSLLGPAFATRLVTQIYFPDD
PLIEIDPIANAVPMPYRNRLICRFDIDTTIANWALGYRFDIVLKGAMQTPFEGTANG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggacatcgcatatgcgcctgacgacgcgggcttgccaccactcctctaccca
gagtatcgctcgaccggattgcgtagtccgcgtcaccccttggtcaacgctccgcagact
ttgactgaggtgagcggccccagcggttgctggagcgctcttatgggtcaagccgaggta
gacctaacgtcgcaacatggatctgctccccatggccagcgcatccgcatctctggcagg
gtgctggatgacagtggtcgtccggtaccaaacaccatcgtcgaaatctggcaggcgaac
gcggccgggcggtatatccatcgcaacgataattgggacgcgccgctcgatccgaacttc
accggagctggtcgggtgattaccgatgatcagggctggtattccttcacgaccatccgg
cccggagcttacccttggggtaaccatcacaatgcatggcgcccggctcatattcacctg
tcgttgcttggccccgccttcgccactcgtctcgtcacccaaatctactttcctgacgat
ccattgatcgagatcgatccgatcgcgaatgcggttccgatgccgtatcgcaatcgcctc
atctgccggtttgatatcgacacgaccatcgccaactgggcgctcggataccgttttgac
atcgtgctgaagggggcaatgcagacgcccttcgagggtactgccaatggataa
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