Sphingobium sp. WTD-1: N6H05_08800
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Entry
N6H05_08800 CDS
T10837
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spwt03000
]
N6H05_08800
Transcription factors [BR:
spwt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
N6H05_08800
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
NMT1
Motif
Other DBs
NCBI-ProteinID:
WIA57874
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Position
1768721..1769872
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AA seq
383 aa
AA seq
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MNPDQFNIRHLAAMAAVVELGSVSLAARAVNLTQPAVTQGIAKLEAQLGLPLFARQPGGM
VALEPAERLKPRIDAALRLIGSNRVTAAQVRAFVALARGGSYAAAAVATGVAEPSLHRAV
GDLGLALGQRLVDRRGRGVMLTRAGTVLAQRLRLALAELRQGLEDLADLRGQEGGRILVG
AMPLSRARLIPDAIARFRADFPLVDISVHEGSHAELVGPLRDGEIDMMVGALRDPAMALD
LTQRPLFEDRPTILARHGHALAAGWDADALRRYPWILPPEGTPLRQLWQAMFAALGGGLP
AVPIECGSVMTIRQLLVGGEYLTLLSHDQLALELEAGLLIDIGPAPGAISRNISLTTRAD
WRPTRLQQQFMAAIDQAAVHMNS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaccagttcaatatccgtcatctcgccgcgatggcggccgtggtggagctt
ggcagcgtcagcctggcggcgcgcgcggtcaacctgacccagccggcggtgacccagggg
atcgccaagctggaggcgcaactgggcctgccgctgttcgcgcgccagcccggcggcatg
gtcgcgctggagccggcggaacggctgaagccccggatcgatgcggctctgcgcctgatc
ggcagcaatcgggtgacggcggcgcaggtgcgcgccttcgtcgccctggcgcgcggcggc
agctatgcagcggcggcagtggcgaccggggtggccgaaccgtcgctgcatcgcgcggtc
ggcgatctggggctggcgctggggcaaaggctggtcgaccggcgcgggcgcggcgtgatg
ctgaccagggcggggacggtgctggcgcagcggctgcggctggcgctggcggaattgcgg
caggggttggaggatctggccgacctgcgcgggcaggagggcgggcgcattctggtcggc
gccatgccgctgtcgcgcgcgcgcctgatccccgatgcgatcgcacggttccgcgccgat
ttcccgctggtcgacatcagcgtgcatgaaggatcgcatgccgaactggtcggcccgctg
cgcgatggcgaaatcgacatgatggttggcgcgctgcgcgatccggcgatggcgctggac
ctgacgcaacggcccttgttcgaggatcgaccgaccatcctggcgcggcacggccatgcg
ctggcggcgggctgggacgccgatgcgctgcgccgctatccctggatcctgccgccggaa
ggcacgccgctgcgccaattgtggcaggcgatgttcgcggcgctgggcggcggtctgccg
gcggtgccgatcgaatgcggatcggtgatgacgatccggcaattgctggtcggcggggag
tatctgaccttgctgtcgcacgatcaactggcgctggagctggaggcggggctgctgatc
gatatcggcccggcacccggcgcgatcagccggaacatcagcctcaccacgcgggccgac
tggcgcccgacccggctacagcagcagttcatggctgcgatcgatcaggctgcggtacat
atgaattcgtaa
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