Sphingobium sp. WTD-1: N6H05_11260
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Entry
N6H05_11260 CDS
T10837
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_11260
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_11260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WIA58338
LinkDB
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Position
2256989..2259211
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AA seq
740 aa
AA seq
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MKGQSKMAVVMASLLVGVASGTLAGVAHAQDMSAGDIIVTAQKREQNVQDVPLSVQVLGE
AQLQANAVQDFNDLSRVSPSLSIRPAENPASANVAIRGVGTLAFSPGVEPSVAVILDDVA
LAFQSRAFTDLSDIERIEVLRGPQTTLYGKSASAGLINIVSKAPTKTLTASVRGMITTDD
EQQIGAVLSGPLTDTLGFRTSVNYDDFKGNSRNLADGKTLNGRRYFSTRNKLRWNPTAEL
QADLAIDYADGRTTATRPFIELGDNAVLRGNPAFTQDVFAPGITVGKDNTDVSIDFPTGN
TYNDFAQSLRLSYDTGGPTIMSITAHDRYKSHDWFDSDDSAITSFQNFQYGHFDSEQFSQ
ELRLISPGKDRFRYTLGAYYSNVDIGRDFYRGPLFSNANWDATNGSDLIAGFGQLEYDPL
PGTTLIAGGRYSREKIDYVFTDLAASRVYAGRSSDGFGTYKLGIKQDVARDMNLYLTYAT
GHKGQAYDISSGFNQARADAGPVNPEKSDSLELGFRSQLLDRKVTLNVTVFSSNFRDFQT
QAVENLADGTQNFRLTNVGKVRIRGLEMETSIRPVAGLTINGSLTYLDAKFREFAGAACY
VNQTAAQGCVGTPPRQDLSGKAMLISPKWKLAGNIDYAQPLGQGPLELVAQGAVTWQSKV
VPLDQNPRTIQPEYAMVNIALGLRSADKSWQVMGFINNLFDQHYRYLINDVSNRYGTTAI
QGYVPRDFHRYGGIRLSYSY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcagtcgaaaatggccgtcgtgatggcgagcctgctggtaggcgtcgcatct
gggacgctggcgggcgtggcccatgcgcaggatatgtcggccggcgacatcatcgtgacg
gcgcagaagcgcgaacagaatgtgcaggatgtgcccttgtcggtgcaggtgctgggcgag
gcccagttgcaggccaatgcggtgcaggatttcaacgatctgagccgcgtgtcgccgtcg
ctgagcatccggccggcggaaaatccggcgagcgccaatgtcgcgatccgcggtgtcggc
accctggccttcagccccggcgtcgagccgagcgtcgcggtgatcctggacgatgtggcg
ctggccttccagtcgcgcgccttcaccgatctttccgatatcgagcggatcgaggtgctg
cgcgggccgcagacgacgctttatggcaagtcggcctcggccggcctgatcaatatcgtg
tccaaggcgccgaccaagacgctgaccgcgtcggtgcggggcatgatcaccaccgatgac
gagcaacagatcggtgcggttctttccgggccgctgaccgacacgctgggtttccgcacc
agcgtcaactatgatgatttcaagggcaattcgcgcaacctggccgatggcaagacgctg
aatgggcgccgctatttctccacccgcaacaagctgcgctggaacccgacggccgagttg
caggccgatctggcgatcgattatgccgatgggcggacgacagcgacgcggcccttcatc
gaactgggcgacaatgcggtcctgcgcggcaatccggccttcacccaggatgtgttcgcg
ccgggtatcaccgtcggcaaggacaatacggacgtgtcgatcgattttccgaccggcaac
acctataatgatttcgcccagtcgctgcggctgagctatgatacgggcgggccgacgatc
atgtcgatcaccgcgcatgaccgctacaagtcgcatgactggttcgacagcgacgattcc
gcgatcaccagcttccagaatttccaatatggccatttcgacagcgagcagttcagtcag
gaactgcggctgatttcgcctggcaaggaccggttccgctatacgctgggtgcctattac
agcaatgtcgacattggccgcgacttctatcgcgggccgctcttttccaacgccaattgg
gatgcgaccaacggcagcgacctgatcgcgggctttggccagctggaatatgatccgctg
cccggcacgacgctgatcgccggtggccgctacagccgggagaagatcgattatgtgttc
accgatctggcggccagccgggtctatgcggggcgcagcagcgacggtttcggcacctac
aagctgggcatcaagcaggatgtcgcacgcgacatgaacctctatctcacctatgcgacc
gggcataaggggcaggcctatgatatctcgtcgggcttcaaccaggcgcgcgccgatgcc
ggcccggtgaacccggaaaagtccgacagcctggaactgggcttccggtcgcagttgctg
gatcgcaaggtgacgctgaacgtcaccgtcttcagttccaactttcgtgatttccagacc
caggcggtggaaaacctggccgacgggacgcagaatttccgcctgaccaatgtcggcaag
gtgcgcatccgggggctggaaatggaaaccagcatccgtccggtggccgggctgacgatc
aatgggtcgctcacctatctggacgccaagttcagggaatttgccggcgcggcctgttat
gtgaaccagaccgcggcgcagggatgtgtcggcacgccgccgcgccaggatctgagcggc
aaggcgatgctgatctcgcccaagtggaagctggcgggcaatatcgattatgcccagccg
ctggggcaggggccgctggaactggtcgcgcagggcgccgttacatggcagagcaaggtc
gtgccgctggaccagaatccgcgcaccatccagccggaatatgcgatggtgaacatcgcg
ctgggcctgcgcagcgccgacaagtcctggcaggtgatgggcttcatcaacaatctgttc
gaccagcattatcgctacctgatcaacgatgtgtcgaaccgctacgggacgacggcgatc
cagggctatgtgccgcgtgatttccatcgttatggcggcatccgcctgagctacagctat
tga
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