Sphingobium sp. WTD-1: N6H05_11505
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Entry
N6H05_11505 CDS
T10837
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt02024
Quorum sensing
spwt03060
Protein export
spwt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N6H05_11505 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N6H05_11505 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N6H05_11505 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spwt02044
]
N6H05_11505 (ffh)
Enzymes [BR:
spwt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
N6H05_11505 (ffh)
Secretion system [BR:
spwt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N6H05_11505 (ffh)
Eukaryotic Sec-SRP protein
N6H05_11505 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_31
AAA_22
AAA_33
ArsA_ATPase
AAA_30
AAA_17
YqeC
TctA
AAA_14
AAA_16
DnaB_C
ABC_tran
Thymidylate_kin
ResIII
APS_kinase
AAA_19
cobW
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIA58689
LinkDB
All DBs
Position
2306872..2308362
Genome browser
AA seq
496 aa
AA seq
DB search
MMFDSLSDRLGGVFDKLRGRGALTEDDVRAAMREVRVALLEADVALPVVRQFVDQATEKA
VGSDVLRSITPGQMVVKIVSDTLTETLGAETSDLLIDVTPPAVIMMVGLQGSGKTTSTAK
IAKRLKDKERKKVLMASLDVQRPAAQEQLAVLGTQIDVATLPIVAGQQPVEIAKRALQSA
KLQGFDVVMLDTAGRLHVDQALMDEMKAVADVANPAEILLVVDSLTGQDAVNVATSFTAQ
VPLTGVVLTRMDGDARGGAALSMRAVTGRPIKFAGTGEKLDALEPFHPARVAQRILGMGD
VVSLVEKAAETIDAEEADKLAKKMAKGQFDMNDLRSQLNQMRRMGGLGALAGMLPGLKKA
QAAMANSGANDKTLLHLDAMIGSMTPKEREKPALINAKRKIRIAKGAGRTVQDVNRLLKM
HQEMETAMKKIRKMGGLKGLAKMFTGGGMGGLGGLGGPGGADGQGGPPDLSGLGGLGGLG
GNMPKLPPGFQNFMKK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgattcgctaagcgatcgtctcggtggggtattcgacaagctgcgtgggcgc
ggtgcgcttacggaggacgatgtccgtgccgcgatgcgcgaagtgcgagtcgcactgctg
gaagccgacgtggcgctgcccgtggttcgccagttcgtcgaccaggccaccgaaaaggct
gtcggcagcgatgtgctgcggtcgatcacgccgggccagatggtcgtcaagatcgtctcc
gacacgctgaccgagacgctgggcgccgaaaccagcgacctgctgatcgacgtcaccccg
cccgccgtcatcatgatggtcggcctgcagggttcgggcaagacgacctcgaccgcgaag
atcgccaagcgcctgaaggacaaggagcgcaagaaggtgctgatggcgtcgctcgacgtc
cagcgcccggccgcgcaggaacagcttgccgtccttggcacccagatcgatgtcgcgacc
ctgccgatcgtcgccggccagcagccggtggagattgcgaagcgcgcgctgcagtcggcc
aagctgcagggcttcgacgtggtcatgctcgacaccgccggccgactgcatgtcgaccag
gcgctgatggacgagatgaaggcggtcgccgacgtcgccaatccggcggaaatcctgctg
gtggtcgactcgctgaccggccaggacgcggtcaatgtcgcgaccagctttaccgcgcag
gtgccgctgaccggcgtcgtgctgacccgcatggatggcgacgcccgtggcggcgcggcg
ctgtctatgcgcgcggtcaccggccgtccgatcaagtttgccggcaccggcgaaaagctg
gatgcgcttgagcccttccatccggcccgcgttgcccagcgcatcctgggcatgggcgac
gtcgtcagcctggtcgagaaggccgccgagacgatcgacgccgaggaagccgacaagctg
gccaagaagatggccaagggtcagttcgacatgaacgacctgcgcagccagctcaaccag
atgcgccgcatgggcggcctgggcgcgctggccggcatgctgccgggcctcaagaaggcg
caggcggcgatggccaatagcggcgccaacgacaagacgctgctgcatctggacgcgatg
atcgggtcgatgacccccaaggagcgcgagaagcccgcgctgatcaacgccaagcgcaag
atccgtatcgccaagggcgccggccgcaccgtgcaggacgtcaaccgtctcctgaaaatg
catcaggaaatggaaacggcgatgaagaagatccgcaagatgggcggcctcaaggggctg
gccaagatgttcaccggcggtggcatgggtggattgggcggcctgggtggaccgggcggc
gcggatgggcagggcggtccgcccgacctgtcgggtctgggtggccttggtggcctgggc
ggcaacatgcccaagcttccgcccggctttcagaatttcatgaagaaataa
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