KEGG   Sphingobium sp. WTD-1: N6H05_11525
Entry
N6H05_11525       CDS       T10837                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spwt  Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:spwt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spwt03016]
    N6H05_11525
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spwt02048]
    N6H05_11525
Transfer RNA biogenesis [BR:spwt03016]
 Prokaryotic type
  tRNA degradation factors
   N6H05_11525
Prokaryotic defense system [BR:spwt02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    N6H05_11525
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: WIA58386
LinkDB
Position
2309639..2310037
AA seq 132 aa
MTHLAYLLDTNICIDFLLGRSARLAERMAAEFDRLSVSAVTAAELRVGNRGSSDPVGDLR
RVDTFLALLNILPFDDAAAHTYAEMVRLVGVRRRGFDRLIGAQAMASAMVLVTRNEKDFA
DIPGLTVEDWSA
NT seq 399 nt   +upstreamnt  +downstreamnt
atgacgcacctcgcttatctgctcgacaccaatatttgcattgatttcctgctcggacgg
agcgctcgtctggccgagcggatggcggccgagttcgatcgcctgtcggtttccgctgtc
actgctgccgaattgcgggtcggcaatcgcggctctagcgatccggtcggcgacctgcgg
cgcgtcgatacatttctggcgctgctgaatatcttgccgttcgatgatgcggcggcgcac
acctatgccgagatggtgcgcctggtgggggtgcgtcgtcgggggttcgatcggttgatc
ggagcgcaggcgatggcgtcggccatggtgctggtcacgcgcaacgaaaaggatttcgcg
gatattcccggcctgacagtggaggattggagcgcatga

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