Sphingobium sp. WTD-1: N6H05_12660
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Entry
N6H05_12660 CDS
T10837
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00910
Nitrogen metabolism
spwt01100
Metabolic pathways
spwt01120
Microbial metabolism in diverse environments
spwt01310
Nitrogen cycle
Module
spwt_M00531
Assimilatory nitrate reduction, nitrate => ammonia
spwt_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
N6H05_12660 (nirB)
Enzymes [BR:
spwt01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
N6H05_12660 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
DAO
Pyr_redox_3
NAD_binding_8
GIDA
FAD_binding_2
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WIA58591
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Position
2538190..2540703
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AA seq
837 aa
AA seq
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MDFQDGIDPVTQDEDNVLPPLGQAREHLVVIGNGMAGCRTVEELLARDAGRYRVTIFGAE
PYVNYNRIMLSPVLAGEKTFEQIVINDAAWYADNGIELIAGDPVTAIDRATKTVSSQSGC
TIGYDKLLIATGSDPFIIPVPGKDLPGVISFRDMKDVDTMLAAAADGGSAVVIGGGLLGL
EAAHGLTLRGMKVTVIHLMDTLMERQLDEAAGWLLKTALEGRGQTILTGANTEAIYGDGK
VEGVRLKDGREIPASLVVMAVGIRPATALARDAGLAVNRGIQVDDHMVTSDPDVLAVGEC
VEHDGNVYGLVAPLWDMCRSLADGLTDQHSGYKGSVTSTKLKVAGLDVFSAGDFSGGEGC
EDIVLRDASRGVYKRVIVKDDKLIGAVLYGDTVDGGWYFDLLKREENVADMRDMLIFGQA
FASGGGALDPKAAVAALSDEAEICGCNGVSKGQVVSCIAKGAHSLDAVRATCKASASCGS
CTGLVETLLALTLGDDVQSGPKTMCKCTSFTHDDVRREIVAQDMRSIPEVMQKLNWSTPE
GCSSCRPALNYYLLCALPGNYQDDQRSRFVNERMHANIQKDGTYSVVPRMWGGLTNPKEL
RAIADVVEKYNAPMVKVTGGQRLDIFGIRKEDLPAVWADLNAAGMVSGHAYGKSLRTVKT
CVGSEWCRFGTQDSTGLGVKIEHMTWGSWMPHKFKIAASGCPRNCAEATIKDFGVVCVDS
GYELHVGGNGGIHVRATDLLCKVATEQEALDYCAAFIQLYREEARYLERTAPWIERVGVD
YVKSRIVADDVGREALRARFLFSQQFMQDDPWARRAAGEDAELHQHLAEVRPMETVA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggactttcaggacgggatcgacccggtcacgcaggatgaggacaatgtcctgccgccc
ttggggcaagcacgcgagcatctggtcgtcattggcaacggcatggccggctgccgcacg
gtcgaggaattgctggcccgcgatgcaggacgctatcgcgtcaccatcttcggcgccgaa
ccctatgtgaactataatcgcatcatgctttcgccggtactggcgggagaaaagacgttc
gagcagatcgtcatcaacgatgccgcctggtatgccgacaatggcatcgaactgatcgcc
ggcgatccggtgacggcgatcgaccgcgccacgaagaccgtttccagccagtcgggctgc
accatcggctatgacaagctgctgatcgcgaccggctccgatccgttcatcattccggtg
cccggcaaggatctgcccggcgtcatcagcttccgcgacatgaaggatgtcgacaccatg
ctcgccgctgccgcggatggcggcagcgcggtggtgatcggcggtggcctgcttggcctc
gaagccgcccatggcctgaccctgcgcggcatgaaggtgaccgtcatccacctgatggac
acgctgatggagcggcagctggacgaggcggccggctggctgctcaagaccgcgctcgaa
gggcgcggccagaccatcctgaccggcgccaataccgaagccatttatggcgacggcaag
gtcgagggtgtgcggctgaaggacggccgggaaattcccgccagcctggtggtgatggca
gtgggcatccgccccgcgaccgcgctggcccgcgacgccggcctggccgtcaatcgcggc
atccaggtcgacgatcatatggtcaccagcgatcccgatgtgctggcggtcggcgaatgc
gtcgaacatgacggcaatgtctatggcctggtcgcgccgctgtgggacatgtgtcgcagt
ctcgccgatggcctgaccgaccagcattcgggctataagggctcggtcacctcgaccaag
ctcaaggtcgcggggctggatgtcttctctgccggggacttttccggcggtgaggggtgc
gaggatatcgtcctgcgcgacgcctcgcgcggcgtctacaagcgggtcatcgtcaaggac
gacaagctgatcggtgcggtgctctatggcgataccgtcgatggcggctggtatttcgac
ctcctcaagcgcgaggaaaatgtcgccgacatgcgcgacatgctgatcttcggccaggcc
ttcgcctcgggagggggcgcactggaccctaaggcggccgttgcggcgctctcggacgaa
gccgagatttgcggctgcaacggcgtcagcaagggccaggtcgtctcctgcatcgccaag
ggcgcgcatagcctggatgcggtccgcgccacctgtaaggcgtcggccagctgcggcagt
tgcaccggcctggtcgaaaccctgctcgcgctgacgctgggcgacgatgtccagtcgggg
ccgaagacgatgtgcaaatgcaccagcttcacccatgacgatgtccgtcgcgaaatcgtg
gcgcaggatatgcgctcgattcccgaagtcatgcagaaattgaactggtcgacgccggag
ggctgctcctcctgccgtccggcgctcaactattatctgctctgcgcgctgccgggcaac
tatcaggacgaccagcgcagccgtttcgtcaacgaacggatgcacgccaacatccagaag
gatggcacctactcggtcgtgccgcgcatgtggggtgggctcaccaaccccaaggaactg
cgcgcgatcgccgatgtggtcgaaaaatataacgccccgatggtcaaggtgaccggcggc
cagcgcctggatatcttcggcatcaggaaagaagacctgcccgccgtctgggccgatctc
aatgcggccggcatggtgtcgggccatgcctatggcaagtcgctgcgcacggtgaagacc
tgtgtggggtccgaatggtgccgtttcggcacccaggattcgaccggccttggcgtcaag
atcgagcatatgacctggggctcgtggatgcctcataaattcaagatcgcggcgtcgggc
tgcccccgcaattgcgcggaggcgacgatcaaggatttcggcgtggtctgcgtcgacagt
ggctacgaactgcatgtcggcggcaatggcggcatccatgtccgcgccaccgatctgctg
tgcaaggtcgcgaccgagcaggaggcgctcgattattgcgccgccttcatccagctctat
cgtgaggaagcccgctatctggagcgcaccgcgccctggatcgagcgcgtcggcgtcgat
tatgtgaagagccgcatcgtcgccgatgatgtcggccgcgaagcgctgcgcgcccgcttc
ctcttctcgcagcagttcatgcaggacgatccctgggcgcgccgcgccgccggcgaggac
gccgaactgcatcagcatctggccgaagtgcgccccatggagaccgtcgcatga
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