Sphingobium sp. WTD-1: N6H05_12795
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Entry
N6H05_12795 CDS
T10837
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00260
Glycine, serine and threonine metabolism
spwt00460
Cyanoamino acid metabolism
spwt00630
Glyoxylate and dicarboxylate metabolism
spwt00670
One carbon pool by folate
spwt00680
Methane metabolism
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
spwt01120
Microbial metabolism in diverse environments
spwt01200
Carbon metabolism
spwt01230
Biosynthesis of amino acids
spwt01240
Biosynthesis of cofactors
spwt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N6H05_12795
09102 Energy metabolism
00680 Methane metabolism
N6H05_12795
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N6H05_12795
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N6H05_12795
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N6H05_12795
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N6H05_12795
Enzymes [BR:
spwt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N6H05_12795
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WIA53956
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Position
complement(2566943..2568262)
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AA seq
439 aa
AA seq
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MSTETLTQPNLSDIRSEGYFTAGLAAADPAVFAGVAQELMREQTQIELIASENIVSQAVL
EAQGSVFTNKYAEGYPGKRYYQGCAPSDVVEQLAIDRAKELFGCQFANVQPHSGAQANGG
VMLALVKPGETIMGLSLDAGGHLTHGSKPSMSGKWFNAVQYGVREDTHLIDYDDVERQAI
ECQPKLIIAGGSAYPRQIDFARFRAIADKVGALFMVDMAHFAGLVAGGAHPSPFGHAHVV
TTTTHKTLRGPRGGMIMTDDEAIAKKINSAIFPGLQGGPLMHVIAAKAVAFGEALQPEFK
TYAQAIVTNAKALAGKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCN
KNGVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEDIGDMIADVLEGLRDNGEHGDAAVE
ASVRERVAALCARFPIYQG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaccctcacccagcccaacctgtcggacattcgttcggaaggctatttc
accgcaggcctggccgctgccgatccggccgtgttcgccggcgttgcccaggaactgatg
cgtgagcagacccagatcgagctgatcgcgtcggaaaatatcgtgtcgcaggccgtgctc
gaagcgcagggcagcgtcttcaccaacaaatatgccgaaggctatccgggcaagcgctat
tatcagggctgcgccccgtcggacgtggtggaacaacttgccatcgaccgcgcgaaggaa
ttgttcggctgccagttcgcgaacgtccagccccattcgggcgcgcaggccaatggcggc
gtgatgctggcgctggtcaagcccggcgaaaccatcatgggcctgtcgctcgacgccggt
ggtcacctgacccacggttccaagcccagcatgtcgggcaagtggttcaacgccgtgcaa
tatggcgtgcgcgaagacacccatctgatcgactatgacgatgtcgagcgtcaggcgatc
gaatgccagcccaagctgatcatcgccggcggcagcgcctatccgcgtcagatcgacttc
gcccgcttccgcgcgatcgcggacaaggtcggcgcgctgttcatggtcgacatggcccat
ttcgccggcctggtcgccggtggcgcccatccctcgcccttcggccatgcccatgtcgtg
accaccaccacgcacaagacgctgcgcggcccgcgtggcggcatgatcatgaccgatgac
gaggcgatcgcgaagaagatcaattcggcgatcttccccggccttcagggtggcccgttg
atgcatgttatcgccgccaaggcggtcgctttcggcgaagcgctgcagcccgaattcaag
acctatgcccaggcgatcgtcaccaatgcgaaggcactggccggcaagctggagcagcgc
ggcctcgccgtggtctcgggcggcaccgacacccacctcgccctcatcgacctgcgcccc
tatggcatttcgggcaaggatgcggacgaggcgctggagcgcagcttcatcacctgcaac
aagaatggcgtgccgggcgacccgctgccgccgaccaagaccagcggcatccgcgtcggc
tcgccggccggcaccacccgcggcttcggcgtcgccgagttcgaggatatcggtgacatg
atcgccgacgttctggaagggctgcgcgacaatggcgaacatggcgatgccgccgtcgaa
gccagcgtccgcgagcgtgtcgccgcgctctgcgcccgcttccccatctatcaggggtaa
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