Sphingobium sp. WTD-1: N6H05_12905
Help
Entry
N6H05_12905 CDS
T10837
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spwt03032
]
N6H05_12905
03036 Chromosome and associated proteins [BR:
spwt03036
]
N6H05_12905
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_12905
DNA replication proteins [BR:
spwt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N6H05_12905
Chromosome and associated proteins [BR:
spwt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
N6H05_12905
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
N6H05_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
GTP_EFTU_D2
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
WIA53977
LinkDB
All DBs
Position
2590531..2590803
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLISAVAESSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASSQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcagcgccgtcgctgaaagcagcggtctcagcaagagcgac
gccagcaaggcggtcgagggcgtgttcgacgccatcaccggcgcgctgaagaagggcgac
gaagtgcgcctggttggttttggcactttctccgtgtcgcagcgcaaggcttcgaccggc
cgcaacccgcgcaccggcgagacgatgacgatcaaggcgtcgtcgcagcctaagttcaag
gccggcaagggcctgaaggattcggtcaactaa
DBGET
integrated database retrieval system
