Sphingobium sp. WTD-1: N6H05_13035
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Entry
N6H05_13035 CDS
T10837
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spwt03032
]
N6H05_13035
03036 Chromosome and associated proteins [BR:
spwt03036
]
N6H05_13035
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_13035
DNA replication proteins [BR:
spwt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N6H05_13035
Chromosome and associated proteins [BR:
spwt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
N6H05_13035
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
N6H05_13035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Nup214_FG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WIA54001
LinkDB
All DBs
Position
complement(2617536..2617826)
Genome browser
AA seq
96 aa
AA seq
DB search
MIRSELIQKLGEENPGLSLQEVEKIVDLFFREIVDRLSGGGRVELRGFGAFTTRARDART
GRNPRTGEQVPVSAKRVPYFKPGKEMRERLNGKAAD
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttctgaactgatccagaaactcggcgaagaaaatccgggcctcagcctgcaa
gaggttgagaagatcgtcgacctcttcttccgggaaattgttgatcgcctgtcgggcggc
ggccgggtcgaactgcgcggcttcggcgccttcaccacccgcgcccgcgacgcgcgcacc
ggccgcaatccccgcaccggcgaacaggtgccggtctcggccaagcgcgtgccctatttc
aagccgggcaaggaaatgcgcgaacggctgaacggcaaggccgccgactga
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integrated database retrieval system
