Sphingobium sp. WTD-1: N6H05_13570
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Entry
N6H05_13570 CDS
T10837
Symbol
tyrS
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N6H05_13570 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spwt01007
]
N6H05_13570 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spwt03016
]
N6H05_13570 (tyrS)
03029 Mitochondrial biogenesis [BR:
spwt03029
]
N6H05_13570 (tyrS)
Enzymes [BR:
spwt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
N6H05_13570 (tyrS)
Amino acid related enzymes [BR:
spwt01007
]
Aminoacyl-tRNA synthetase
Class I (A)
N6H05_13570 (tyrS)
Transfer RNA biogenesis [BR:
spwt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N6H05_13570 (tyrS)
Prokaryotic type
N6H05_13570 (tyrS)
Mitochondrial biogenesis [BR:
spwt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
N6H05_13570 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WIA54099
LinkDB
All DBs
Position
complement(2720774..2721991)
Genome browser
AA seq
405 aa
AA seq
DB search
MSNYQSDLLRLLEARGYIHQLTDAEGLDAMAAKQVVPGYIGFDPTAPSLHVGHLVSIMML
RQLQKAGHKPIVLMGGGTGKIGDPSFKDEARKLLTVDLIQENVASIKRVFERFLTFGDGP
TDAIMVDNADWLDKLEYIPFLRDIGQHFSVNRMLSFDSVKLRLDREQSLSFLEFNYMILQ
AYDFLELSRRSDCRLQMGGSDQWGNIVNGVELARRVDGTQVFGLTTPLLTNADGTKMGKT
VGGAVWLNQDQLSDYDYWQFWRNTADADVFNRLRLFTDLPMDEVNRLAALQGAEINEAKK
ILANEATALCRGIEAAALAAETARKTFEEGASDANLPTVALGAEGLTVIQATTGLGFATS
NKEVRRKLAEGAIKVNGAVVTDPAVTLKAGDKLSFGAKKHGLVTA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactatcagtccgatctcctccgcctgctcgaagcacgcggctacatccaccag
ctgaccgacgcggaagggcttgatgccatggccgccaaacaggtggtgccgggctatatc
ggcttcgacccgactgcgccgtcgcttcatgtcggccacctcgtgtcgatcatgatgctg
cgccagctgcagaaggcaggtcacaagccgatcgtcctgatgggcggcggcaccggcaag
atcggcgatcccagcttcaaggatgaggcgcgcaagctgctgaccgtcgacctgatccag
gaaaatgtcgccagcatcaagcgcgtgttcgaacgcttcctgaccttcggcgacggcccg
accgacgcgatcatggtcgacaatgccgactggctcgacaagctcgaatatatcccgttc
ctgcgcgacatcggccagcatttctccgtcaaccggatgctgagcttcgacagcgtgaag
ctgcgcctcgatcgcgagcagtcgctcagcttcctcgaattcaactacatgatcctccag
gcctatgacttcctggagctgtcgcgccgcagcgattgccgcctgcagatgggcggatcg
gaccagtggggcaatatcgtcaacggcgtcgaactggcccgccgcgtggacggcacgcag
gtgttcggcctcaccacgccgctgctgaccaatgccgacggcaccaagatgggcaagacc
gtgggcggcgccgtctggctgaaccaggatcagctgtccgactatgattattggcagttc
tggcgcaacaccgccgatgccgacgtattcaaccggctgcgcctgttcaccgatctgccg
atggacgaggtcaaccgcctcgccgcgctgcagggcgcggagatcaacgaggccaagaag
atcctggcgaacgaggccaccgcgctctgccgtggcatcgaagccgccgctctggccgcc
gaaaccgcgcgcaagaccttcgaggaaggcgcgtcggacgccaacctgcccaccgttgcg
ctgggcgccgaggggctgaccgtcatccaggcgaccaccggccttggttttgcgacctcc
aacaaggaagtccgccgcaagctggccgagggcgcgatcaaggtgaatggcgcagtcgtc
accgacccggccgtcacgctcaaggccggcgacaagctcagctttggcgccaagaagcac
ggtctggtcaccgcctga
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