Sphingobium sp. WTD-1: N6H05_14375
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Entry
N6H05_14375 CDS
T10837
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6H05_14375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spwt03019
]
N6H05_14375
Enzymes [BR:
spwt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
N6H05_14375
Messenger RNA biogenesis [BR:
spwt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N6H05_14375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
DUF2336
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
WIA54252
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All DBs
Position
complement(2896972..2898183)
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AA seq
403 aa
AA seq
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MTRILPDAPWRHRSGLSGLLAALDADQGRARYVGGAVRDGLLGLPVNDLDIATSLMPQDV
VARLKGAGIKAVPTGIEHGTITAVLPDGPVEITTLRRDVSTDGRRATIAYTDDWQQDAAR
RDFTFNALYADPLTGAISDYFGGVADLDARHLRFIGDASARIAEDHLRILRYFRFLARYG
DNEVDASAYDACVAAANSLMALSRERIADELLKLLVVRDPVPALRLMVDGGIWLPVLPEI
THEGIDRLTKLIARENEANMAPSALRRLAALVPADAALADQIGARLKLSNKARKRLITAL
ETASAPEGPRALAHRVGVEGAIDRILLDPAVPLSALVPLDGWTPPSLPIGGGALIARGLQ
PGPDVARALQEVQKSWVAEDFPDADRVGEIADQIVSKFQRTRQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcattcttcctgacgccccgtggcgccaccgttccggcctttccggccttctc
gccgcactcgacgccgaccagggccgtgcccgctatgtcggtggcgcggtgcgcgacggg
ctgcttggcctgccggtcaatgatctcgacatcgccaccagcctgatgccgcaggatgtg
gtcgctcggctgaagggagccgggatcaaggcggtgccgaccgggatcgagcatggcacg
atcaccgccgtgctgcccgacgggccagtcgagatcaccacgctgcgccgcgatgtcagc
accgacggccgccgcgccaccatcgcctataccgacgactggcagcaggatgccgcccgg
cgcgatttcaccttcaacgccctctatgccgatcccctgaccggcgcgatcagcgactat
ttcggcggcgtggccgatctcgacgcccggcacctgcgtttcatcggcgatgccagcgcc
cggatcgccgaggatcatctgcgcatcctgcgctatttccgtttcctggcccgctatggt
gacaacgaagttgacgcatccgcctatgatgcgtgcgtcgccgcagccaacagcctgatg
gccctgtcgcgcgagcggatcgccgacgaactgctcaaattgctggtggtgcgcgatccc
gtgccggcgctgcggctgatggtggacggcgggatctggctgccggtgctgcccgaaatc
acacacgaaggcatcgaccggctgacgaagctgatcgcacgggagaatgaggcgaacatg
gcgccatcggcgctgcgccgattggccgcgctggtgccggccgacgcggcgctggcggac
cagatcggcgcacggctcaaactgtccaacaaggcgcgcaagcggctgatcaccgcgctc
gaaaccgcctccgcacccgaagggccgcgcgcgctggcgcaccgggtcggcgtggaaggc
gcgatcgaccgcatcctgctcgatcccgcagtacccctgtcggcactggtcccgctcgac
ggctggacgccgcccagcctgccgatcggcggcggcgcgctgatcgcgcgcggccttcag
cccggcccggacgtcgcccgtgccttgcaggaagtccagaaatcatgggtggcggaggat
ttccccgacgccgaccgggtcggcgaaatcgcagatcagatcgtctcgaaattccagcgc
acgcgccaatag
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