Sphingobium sp. WTD-1: N6H05_15390
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Entry
N6H05_15390 CDS
T10837
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N6H05_15390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_15390
Enzymes [BR:
spwt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
N6H05_15390
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N6H05_15390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WIA54443
LinkDB
All DBs
Position
complement(3071600..3072382)
Genome browser
AA seq
260 aa
AA seq
DB search
MKILDPRVNLWPKGIVMRGLERDFGAAAPDAYLAWWSLAGVDGAVAEAPVNWLRPQPTRV
QIAEQAAKAFAPPPPEKPKTLDAYLEWLASDSAQPERKWPGTPILPAGPAEASLMVITDM
PDMADVGAGHLFADRAGALFDAMMRAIGLRRDDICLTSLFTVRPAGGMVEASDLAHAADR
IRLHVHLAAPRRLLLLGDRTARALLPTDGADQSASLRPFNHDGGTVPVIATFHPRLLLSQ
PAAKAECWRALQSLIEEDRP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgaccctcgcgtcaacctctggcccaagggcatcgtgatgcggggatta
gagcgggactttggagccgcagcgcctgacgcttatttggcgtggtggtcgctggcgggg
gtggatggcgccgtagcggaagctccagtcaactggttgcggccgcaaccgacgcgcgtc
cagatcgccgagcaggctgcgaaagcctttgccccgccaccgcccgaaaaacccaagacg
ctcgacgcctatctcgaatggcttgccagtgattcggcccagcccgaacgcaaatggccc
ggcaccccgatcctaccggccggcccggccgaggcgtcgttgatggtcattaccgacatg
cccgacatggcagatgtcggcgcgggccatttgttcgccgatcgtgccggcgccttgttc
gacgccatgatgcgcgccatcggcctgcgccgcgacgatatctgcctgacctcactgttc
accgtccgccccgctggcggcatggtggaggcaagcgatctggcgcatgcggccgatcgc
atcaggctgcatgtccatctcgccgcgccccgccgcctgctcctgctgggcgatcggacg
gcccgtgctctgcttccgaccgacggcgccgatcagtccgccagtttacgcccctttaac
catgatggcggcactgtgcccgtcattgccacattccatccgcgcctgctgctcagccag
cccgcggccaaggcggaatgctggcgcgccctgcaaagcctgattgaggaagatcgcccg
tga
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