Sphingobium sp. WTD-1: N6H05_15430
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Entry
N6H05_15430 CDS
T10837
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00330
Arginine and proline metabolism
spwt00480
Glutathione metabolism
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
spwt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
N6H05_15430
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N6H05_15430
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
N6H05_15430
Enzymes [BR:
spwt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
N6H05_15430
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WIA54451
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Position
complement(3080514..3081707)
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AA seq
397 aa
AA seq
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MHKHHSALGVATALTPAAPVTLIRPEAAARAARFFTEKFPGRSLYAVKANPSPDLIRTLF
ASGITHFDVASIAEVRLVAETLEGKAKLCFMHPVKAEEAIAEAYHVHGVRTFSLDTIDEL
EKIMRATGDATDLELCVRLRVSSEHSELSLASKFGAELGETRELLMATRQAADALGICFH
VGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDVGGGFPSIYPGMEPVALENYFEAIHRG
FESLPVSYSSELWCEPGRALSAEYSSIIVRVERRRGQELYINDGAYGALFDAAHIGWRFP
VALLRGDESEEELEGFSFYGPTCDDMDHMVGPFMLPADVKVGDYIEIGMLGAYGAAMRTG
FNGFTSESTIEVSDEPMASLYAETLPARRRATVIKLG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaagcatcatagcgcgctgggggtagcgaccgccctcacaccggcagcaccggta
acgctgatccgtcccgaagccgcagctcgggccgcccgtttcttcactgagaagtttccg
ggtcgctcgctctatgcagtcaaggcgaatccgtctcctgatctgatccgtacgcttttc
gcatcgggcatcacgcatttcgacgtggcctcgattgccgaagtgcgtctcgttgccgaa
acgctcgaaggcaaggccaagctctgcttcatgcacccggtcaaggccgaggaagcgatc
gcggaagcttaccatgtccatggcgtgcgcaccttctcgctcgacacgatcgacgagctg
gaaaagatcatgcgcgccaccggtgatgcgaccgatctggagctgtgcgtgcgcctgcgc
gtctcgtccgaacattcggaactcagcctggcgtcgaagttcggcgcggagctgggcgaa
acccgcgagctgttgatggcaacccgtcaggccgccgatgcgctgggcatctgcttccat
gtcggcagccaagcgatgagcccccaggcctatagcgatgcgatcgagcgtgtgcgcgcc
gcgatcgtggacgcagccgtcacggtcgacatcatcgatgtcggcggcggcttcccgtcc
atctatccgggcatggagccggtcgcgctcgaaaattatttcgaagcgatccatcgcggc
ttcgaaagcctgcccgtcagctattcatcggaattgtggtgcgaacccggccgcgcgctg
tcggccgagtacagctcgatcatcgtgcgcgtcgaacgccgccgtggccaggaactctac
atcaacgacggcgcctatggcgcattgttcgatgccgcgcatatcggctggcgtttcccc
gtcgccctgctgcgcggggatgagagcgaggaagagctggaaggcttttccttctacggc
ccgacctgcgacgacatggaccatatggtcggcccgttcatgctccctgcggacgtgaaa
gtcggcgactatatcgagatcggcatgctcggcgcctatggcgcggcgatgcgcaccggc
ttcaacggcttcacgtcggaatcgacgatcgaagtgtcggacgagccgatggccagcctc
tatgccgaaactctgccggcccgtcgtcgcgcaactgtcatcaagctcggttaa
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