Sphingobium sp. WTD-1: N6H05_15735
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Entry
N6H05_15735 CDS
T10837
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt03030
DNA replication
spwt03430
Mismatch repair
spwt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N6H05_15735
03430 Mismatch repair
N6H05_15735
03440 Homologous recombination
N6H05_15735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spwt03032
]
N6H05_15735
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_15735
Enzymes [BR:
spwt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N6H05_15735
DNA replication proteins [BR:
spwt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N6H05_15735
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N6H05_15735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
nSTAND1
AAA_22
Mg_chelatase
DUF815
DNA_pol3_delta
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WIA54510
LinkDB
All DBs
Position
complement(3142887..3143858)
Genome browser
AA seq
323 aa
AA seq
DB search
MTSLVGHDAQAQTLLAAASSGRMHHGWILSGPRGIGKASFARAMAMRLLADAAGPKIEDE
GLAVPESHPIRRLIEASAHPDYAELAPLEKDGVTARNISVDQVRGLQRLIQSAPSLSSRR
IVVIDSADDLERGAANALLKTLEEPPADMIFLLVSHAPGRLLPTIRSRCRTMRFDPLSDG
AMATVLRREDESLSGPELDALLRAGEGSPGRALRYAGLELAGLEKSLLAIAADGDPGNRE
RLRLAKTLAGKAAKPRYEAFLERAPAFIAQAARTRHGPALGSALDHWEAARHLAGGAVIL
SLDPASVVFELGGHVAALADTAT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggttgggcatgatgcccaggcgcagaccctgctggcggcggcgagcagc
ggccgcatgcatcatggctggatcttgagcggcccgcgcggcatcggcaaggccagcttt
gcccgcgccatggcgatgcgcctgctggcggatgcggccggtccgaagatcgaggacgag
gggctcgccgttcccgaaagccacccgatccgtcgcctgatcgaggcgagcgcccatccc
gattatgccgagctggcgccgctggagaaggatggcgttaccgcacgcaacatcagcgtc
gaccaggtgcgcggcctgcagcggctgatccagtcggcgccgtcgctttcctcccgtcga
atcgtcgtgatcgacagtgccgatgatctggagcgcggcgcagccaacgccctgctcaag
acgttggaagagccgccggcagacatgatcttcctgctggtcagccatgcgccgggccgg
ctgctgccaaccatccgctcgcgctgtcgcacgatgcgcttcgatccgctgtccgacggg
gccatggcgacggtgcttcggcgggaggatgaaagcctgtctgggccggaactggacgcg
ctgctgcgcgccggggagggttcgccgggtcgtgcgctgcgctatgcgggcctcgagctt
gcgggcctcgaaaaatcgctgctggcgatcgcggccgacggcgatccgggcaatcgcgaa
cgcctgcgcctggctaagacgttggcaggcaaggcggccaagccgcgttacgaagccttt
ctggagcgcgcgcccgccttcattgcacaggcggcccggacccgccatggcccggcactg
ggcagcgcgctcgatcattgggaagcagcccggcatctggcgggcggtgcggtcatcctg
tcgttggacccggcctcggtcgttttcgagctgggcgggcatgtcgcggcgctggctgat
acggcgacctga
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