Sphingobium sp. WTD-1: N6H05_15935
Help
Entry
N6H05_15935 CDS
T10837
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spwt03400
]
N6H05_15935 (addB)
Enzymes [BR:
spwt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N6H05_15935 (addB)
DNA repair and recombination proteins [BR:
spwt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N6H05_15935 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WIA54546
LinkDB
All DBs
Position
complement(3190483..3193461)
Genome browser
AA seq
992 aa
AA seq
DB search
MGDQAKPALYTIPAHRAFADALVAGILAQQGSDPVRLAQGMILLPSNRAVRAVSDAFVRR
AEGGLLLPRLVALGDPELGEEVGGALDPLWEGNAVPAAIPPMRRQMILARMVQDAGGAAD
AGQALQLGQALGAVLDQMQVERVPLDALSNLDLIEGLSSHWEKSLDLFSILIARWPAELA
RLGFIDLADRRNRLFDRVAARWGEAPPPGFIVAAGISATAPAIARLLRRIAELPNGQVIF
AGLDQNLDEDAWTAIGPFPPDPVTGRSAAGHETHPQYALKRLLDRMSASREDVAQWRWGS
EHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALREA
LETPELTAALVTPDRQLAVRVSAHLRRWGIDADDSAGQPLSRLPPGTLLIAMAEAAAERF
APVALLTLLKHPLVMRGAMRLPWLEGVRQLDLLLRGPRPQAGLRGIDLLLEPREGEDRQK
EFRAQARAWWPWARDLLEPLEAAFALAPDLAGQLAAVREQAGALTNDALWAGHQGHAAAD
LFAEMEAAATEGPRQADIRSLPALLDHMLGGVSVRPPQGGHPRIAILGLVEAQLVQADLM
ILGGLNEGSWPGLPSPDPWLAPRIRRELGLPGLETRIGLAAHDFASALGAPHVLITRARR
GSGGPAIASRFWLRLKAMAGPQWKTADRYRLLADALDLPPSHRPSQRPAPVPPLAVRPTR
IPVTDVDRLKADPFAFYARRILKLNRLDPVDADAGPAWRGTVVHEILEHWAQGGSRDPAD
LEARARAMFARPDVHPLLRALWQPRLIEAIRWIAAEVTKDQAAGRHILAVETEGKAEIAG
VLLTGKADRIDRMPDGSIGIVDYKTGKPPSARQVRGGYALQLGLLGLIAESAHGAFPGVA
GARVAGSFEYWSLAKKGDAFGYRESPVDPMGKRDKIVTADFTAFVYDQFRDAAETWLTGT
APFAAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcaggccaagccggcgctgtacaccatcccggcgcaccgggccttcgccgac
gcgctggtcgccggcatattggcgcagcaggggagcgatcccgtccgcctggcgcagggc
atgatcctgctgcccagcaatcgcgcggtccgtgccgtcagcgacgcctttgtccggcgg
gccgagggcggcctgctgctgccgcgcctggtcgcgctgggcgatccggaactgggcgag
gaagtgggcggtgcgctcgatccgctctgggaaggcaacgccgttccggccgccatcccg
ccgatgcggcgacagatgatccttgcgcgtatggtgcaggatgcaggcggcgcggccgat
gccggtcaggcgctgcaactggggcaggcgctgggcgccgtgctcgaccagatgcaggtg
gagcgggtgccgctcgatgcgctgtcgaatctcgaccttatcgaggggctgtcgagccat
tgggaaaaatcgctcgacctattctccatcctgatcgcgcgttggccggccgaactggcg
cggctgggcttcatcgaccttgcggatcggcgcaaccggttgttcgatcgggtcgcggcg
cgctggggcgaagcaccgccaccaggtttcatcgtcgcggccggcatcagcgcaaccgct
ccggcgatcgctaggctgctgcggcggatcgccgaactgcctaatgggcaggtgatattc
gccggcctcgaccagaatttggatgaagatgcctggacggcgatcggtccattcccgccc
gatcccgtcaccggccgcagcgccgcagggcatgagacccatcctcaatatgccttgaag
cgcctgctcgaccgcatgagcgccagccgcgaggatgtcgctcaatggcgctggggcagc
gagcatgatgcccgcgctgtgcgcggccgcaatatttccaacgcgatgctgccgccgcgc
ctgactagtcgctggcgtgacctcaagaccgccgaccgctcgctcgccggggtcgaggcg
ctggaggtggcgacgcccggcgaggaagcgcaggccattgccatcgcgctgcgtgaggcg
ctggaaacacccgaactcaccgccgcgctggtaacgcccgaccgacaactcgccgtgcgt
gtctccgcccatctgcgccgttggggcatagacgccgacgattccgcgggccagcctttg
tcgcgcctgccgcccggcaccttgctgatcgccatggcggaggcggcggccgagcgcttt
gcgccggtcgcgctgctgaccctgctcaagcatccgctggtgatgcgcggcgcgatgcgc
ctgccctggctggagggggtgcgtcagctcgacttgctgttgcgggggccgcggccgcag
gcggggctgcgcggcatcgacctgctgctggagccacgcgagggagaggaccggcagaag
gagtttcgggcgcaggcccgcgcctggtggccctgggcgcgtgatctgctcgaaccgctg
gaggccgccttcgcgctcgcgcctgatctggcggggcaattggcggcggtgcgcgaacag
gccggggcgctcaccaacgacgcgctttgggccgggcatcagggtcatgccgccgccgac
ctgttcgccgagatggaggccgccgccaccgaagggccgcgccaggccgatatccggtcg
ctgccggcgctactcgaccatatgctgggcggcgtgtcggtgcgaccgccacagggcggc
catccgcgtatcgccatattgggtctggtcgaggcgcagttggtgcaggcagacctcatg
atcctgggcggcctcaacgaaggcagctggccgggcctgccatcgcccgatccctggctg
gcgccgcgcattcgtcgcgaactgggcttgccgggcctcgaaacccggatcggccttgcc
gcgcatgattttgcgagcgcgctcggcgcgccccatgtcctcatcacccgcgcccggcgc
ggcagcggcggcccggcaatcgcctcgcgtttctggctgcggctgaaggcgatggcgggt
ccgcaatggaagacggccgatcgctatcgcctgctggccgatgcgctggacctaccgccc
agccatcggccatcgcaacgccccgcgccggtgccgccgctcgccgtccggccaacccgc
attccggtcaccgatgtcgaccggctgaaggccgatccctttgccttctatgcccggcgc
atcctgaagctcaatcggctcgatccggtcgatgccgatgccggcccggcgtggcgcggg
acggtcgtgcatgagatattggagcattgggcgcagggcggcagccgtgatccggccgat
ctggaggcgcgcgcccgcgccatgttcgcccggcccgatgtccatccgctgctgcgcgcg
ctgtggcaaccgcgcctgatcgaggcgatccgctggatcgcggccgaagtgacgaaggat
caggctgcgggccggcatatccttgcggtcgaaaccgagggcaaggctgagattgccggc
gtgctgctgaccggcaaggccgaccgcatcgaccggatgcccgacggcagcatcggcatc
gtcgactacaagacgggcaagccgcccagcgcgcggcaggtgcgcggcggctatgcgttg
cagctcggcctgctcggattgatcgcggaatccgcccatggcgcctttcccggtgtagcc
ggcgcgcgggtggcgggcagtttcgaatattggtcgctggccaagaagggcgacgccttc
ggctatcgcgagagcccggtcgatccgatgggcaagcgcgacaagatcgtcaccgccgat
tttaccgccttcgtctatgatcagttccgcgacgcggccgaaacctggctcaccgggact
gcgcccttcgccgcacaggtcaatccggaagtggccaattatggcgattatgaccagttg
atgcggctggaggaatggtatgggcgcgacgatggctaa
DBGET
integrated database retrieval system
