Sphingobium sp. WTD-1: N6H05_16985
Help
Entry
N6H05_16985 CDS
T10837
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00061
Fatty acid biosynthesis
spwt00071
Fatty acid degradation
spwt01100
Metabolic pathways
spwt01212
Fatty acid metabolism
spwt02024
Quorum sensing
spwt04146
Peroxisome
Module
spwt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N6H05_16985
00071 Fatty acid degradation
N6H05_16985
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N6H05_16985
09145 Cellular community - prokaryotes
02024 Quorum sensing
N6H05_16985
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spwt01004
]
N6H05_16985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spwt04147
]
N6H05_16985
Enzymes [BR:
spwt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N6H05_16985
Lipid biosynthesis proteins [BR:
spwt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N6H05_16985
Exosome [BR:
spwt04147
]
Exosomal proteins
Exosomal proteins of breast milk
N6H05_16985
Exosomal proteins of breast cancer cells
N6H05_16985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
WIA54743
LinkDB
All DBs
Position
3430937..3432472
Genome browser
AA seq
511 aa
AA seq
DB search
MSLTLQAVAPHRRTDMALTDERVSLDWLQLDDLLNRAANALNGLDLHERRVAVFAPNSAE
TVIAYVACLEAGISSVPVSFHLTPSEAAYILKDSGAVALLVGPETMEAGLAAAAEAGVAT
VVGWRCPDREGLIHWEAWLAAASTAEPDPSVAPLPHLHYTSGTTGRPKATETPPQYFPRV
ATVQALAETVRARITPSPGIAVGPLYHTGPLGMARNVFGGMSLITVEHFDAEKALALIEK
YRVAGSVMVPTHFQRMLALPEEVRAKYDVSSIQRLAHTGAACPRAVKQAMIDWFGPVLVE
AYGGTEAGSTTFITSSEWLERPGSVGRALAPFETVIYGDDGAVLGANEVGQVYFRDTSGH
GIVYRGDPEKTAAAHIAPGIFTLGEMGYVDDAGYLFITDRVSDMIVSGGVNIYPAESEHV
LLRHPKVADIAVVAAPNAEMGEEARALVIPRDPADPPSAEELNAFCRASLAGYKCPRGYE
MVDDIGRTIMGKVNKKALRQRFWTSDRTIGG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaccctccaggctgtcgcgccccaccgtcgcaccgacatggcgctgacggac
gagcgtgtctcgctcgactggctgcaactggatgatctgctcaaccgcgctgccaatgcc
ctgaacggcctcgacctgcacgaacggcgcgtcgccgtcttcgcccccaacagcgcggaa
accgtgatcgcctatgtcgcctgtctggaggccggcatttccagcgtcccggtcagcttc
catctcaccccgtcagaggccgcctatatcctcaaggacagcggcgccgtcgccctgctg
gtcggcccggaaacgatggaggcgggcctcgccgccgcggccgaggccggcgtcgccacc
gtcgtcggctggcgctgccccgatcgcgaaggcctgatccattgggaagcgtggctcgcc
gccgcctcgaccgccgagcctgaccccagcgtcgcgccgctgccccatctccattatacc
tctggcaccaccggccggcccaaggcgaccgagaccccgccgcaatatttcccgcgcgtc
gccacggttcaggcgctggcggaaaccgtgcgcgcccgcatcaccccctcgcccggcatc
gccgtcggcccgctctaccataccggcccgctcggcatggcgcgcaacgtcttcggcggc
atgagcctcatcacggtcgagcatttcgacgcggaaaaggcgctggcgctgatcgagaaa
tatcgggtcgccggctcggtcatggttcccacccatttccagcgcatgctcgccctgccg
gaagaggtgcgcgcaaaatatgacgtctccagcatccagcgtctcgcccataccggcgcg
gcctgcccgcgcgccgtcaagcaggcgatgatcgactggttcggcccggtgctggtggag
gcctatggcggcaccgaggccggctccaccaccttcatcacctcgtccgaatggctggag
cgtcccggatcggtcggccgcgccttggccccgttcgaaaccgtcatctatggcgacgac
ggcgcggtgctgggcgccaacgaggttggccaggtctatttccgcgacaccagcggccat
ggcatcgtctatcgcggcgaccctgaaaagaccgccgccgcccatatcgcgcccggcatc
ttcaccctgggcgagatgggctatgtcgatgacgcaggctatctcttcatcaccgatcgc
gtgtccgacatgatcgtgtcgggcggcgtcaacatctatccggcggaatccgaacatgtg
ctgctgcgccatcccaaggtggccgacatcgccgtggtcgccgcccccaatgcggagatg
ggcgaggaagcccgcgcgctggtgatcccgcgcgatccggccgatccgccgagcgccgaa
gagctcaacgccttctgccgcgccagcctcgccggctataaatgcccgcgcggctacgag
atggtcgatgatatcggccgcaccatcatgggcaaggtcaacaagaaggcgctgcgccag
cgtttctggacctccgaccggacgatcgggggctga
DBGET
integrated database retrieval system
