Sphingobium sp. WTD-1: N6H05_18340
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Entry
N6H05_18340 CDS
T10837
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_18340
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_18340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
WIA54979
LinkDB
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Position
complement(3723086..3725464)
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AA seq
792 aa
AA seq
DB search
MPSISSVRRVSRAALLLACCTGALSSAALAQEAAPADEDSTITVTGRRISQSSEAIGEDK
INNVVAVTREALLSAPSGISGLKMLEQLPGFNVQTDGALGLYEFGNSVQTRAFNLDQIGF
VVDGIPTGRSDAFGGSPVFRYVDNENLGVVEASVGAADVGLPSYSSLGPVVQYNSIAPQE
EMGLFVSQSFGDNNMKRTFIRASTGRVGPFKAYVSRTKLDSDLWRGPGSVDREHWEGQIH
ADLGGDSWARFKFVSNDFFDYDSPTITRAQYNCTVKSVVGTCGRDFAYIENVPNTTTGFA
PTAAGVYYSNSNYTNVYNLAINVRKDKLYGGTFHLGVADGVWAESTLYYEDKNGYGVSPD
SYSNSLTRYTAQAAAGLDVTAPKGVQYGRSGVGGDRYGVTTKLHWESGNNVVEGGIWAEV
DKYHRTQARYNTMDGAPDGEPNLDELVYLRRDYRSQRDTLQIFLKDTLKLMDDRLVLDAG
FKGLMLDYRLGGYRDFDDYYRVVGGTAVAGWGPQYNTAHYRDMFLPMAGLLFKINERSQI
FASYAETMALPKGMDDIYAVTRTGTSALVPQPKAERSQNMEIGFRTNQGQLYASIAGYYT
KFKNRIQSITTFQEGGGSTTETFYQNVGRVESYGVEASGTYKPAFLNGLAYANANVTYNN
AKFQDDIVASVTYATSGKYIPDSAKWIVSGGVTIEPASWLVANISGKYTSKRWSTFTNTA
GSSVPAYTVFSGYVDIGDGWSFGPVKSIKARFNVDNIFDKDTLSYISSSVTGDGAFRPLS
PRTFQFTISGEI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatttcgtctgtccgtcgcgtttcgcgcgctgcgcttctgcttgcctgctgc
accggcgcgctgtcatctgccgccctggcccaggaagcggcgccggcggatgaggatagc
acgatcaccgtgaccggtcgtcgtatctcgcaatcgtcggaagcgattggcgaagacaag
atcaacaatgtcgtcgccgtcacgcgcgaggcgctgctgtcggcgccgtcgggcatttcg
ggcctgaagatgctggagcaactgcccggcttcaacgtccagaccgacggtgcgctgggc
ctctatgaattcggcaacagcgtccagacccgcgccttcaacctcgaccagatcggtttc
gtggtcgacggcatcccgaccggtcgcagcgacgctttcggcggcagccctgtcttccgc
tatgtcgacaatgaaaatctgggcgtggtggaagcctccgtcggcgccgcggatgtcggc
ctgcccagctattccagccttggcccggtggtgcagtataacagcatcgccccgcaggag
gagatgggcctgttcgtgtcgcagagctttggcgacaataatatgaagcgcaccttcatc
cgcgccagcacgggccgggtgggcccgttcaaggcctatgtcagccgcaccaagctggac
agcgacctgtggcgtggccccggttcggtcgatcgcgaacattgggaaggccagatccat
gccgatctgggcggcgacagctgggcgcgcttcaagttcgtgtcgaacgacttcttcgac
tatgactcgccgacaatcacccgcgcccaatataattgcacggtgaagagcgtggtcggc
acctgtggccgcgacttcgcctatatcgaaaatgtgcccaacaccacgaccggcttcgcg
ccgacggcggcgggcgtctattattccaattccaactacaccaatgtctacaacctcgcg
atcaacgtgcggaaggacaagctttatggcggcaccttccacctgggtgtcgctgacggc
gtgtgggcggaatcgaccctctattatgaggacaagaatggctatggcgtctcgcccgac
agctattcaaactcgctgacccgctacacggcacaagcggccgccggtctggacgtgacc
gcgcccaagggcgtgcaatatggccggtcgggcgtgggcggcgatcgctatggcgtgacc
accaagctgcactgggaaagcggcaataatgtcgtggaaggcggcatctgggccgaagtc
gacaaatatcaccgcacccaggcgcgctacaacacgatggacggcgcccccgatggcgag
cccaatctggacgaactggtctatctgcgccgcgactatcgttcgcagcgcgacacgctg
cagatattcctgaaagacacgctcaagctgatggatgaccggctggttctggatgcgggc
ttcaaggggctgatgctggactatcgtctgggtggctatcgcgacttcgacgactattat
cgcgtcgtgggtggcactgcggtggctggctgggggccgcagtataacacggcccattat
cgcgacatgttcctgccgatggccggcctgctgttcaagatcaacgagcgcagccagatc
ttcgcctcctatgccgagacgatggcgctgcccaagggcatggatgatatctatgccgtg
acgcgtaccggtacgtcggcgctggtgccccagcccaaggcggaacgctcgcagaatatg
gaaatcggcttccgcaccaatcaggggcagctctacgcctcgatcgcgggctattacacc
aagttcaagaaccgcatccagtcgatcacgaccttccaggaaggcggcggcagcaccacc
gaaaccttctaccagaatgtcggtcgggtcgaatcctacggcgtggaagccagcggcacc
tacaagccggccttcctcaacggcctggcctatgccaacgccaacgtcacctataacaac
gccaagttccaggacgatatcgtcgcgtcggtcacctatgcgacctccggcaaatatatt
ccggacagcgccaagtggatcgtcagcggcggcgttacgatcgagccggcaagctggctg
gtggcgaacatcagcggcaaatatacctcgaagcgctggtcgaccttcaccaacacggcg
gggtcaagcgtgccggcctacaccgtgttcagcggctatgtggacattggcgacggctgg
agcttcggcccggtgaagagcatcaaggcgcgcttcaacgtcgacaatatcttcgacaag
gacacgctgtcctacatctcttcctcggtgacgggcgacggtgccttccggccgctgtcg
ccacgcaccttccagttcaccatttcgggcgaaatctga
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