Sphingobium sp. WTD-1: N6H05_18380
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Entry
N6H05_18380 CDS
T10837
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00071
Fatty acid degradation
spwt00280
Valine, leucine and isoleucine degradation
spwt00310
Lysine degradation
spwt00362
Benzoate degradation
spwt00380
Tryptophan metabolism
spwt00410
beta-Alanine metabolism
spwt00640
Propanoate metabolism
spwt00650
Butanoate metabolism
spwt00907
Pinene, camphor and geraniol degradation
spwt00930
Caprolactam degradation
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
spwt01120
Microbial metabolism in diverse environments
spwt01200
Carbon metabolism
spwt01212
Fatty acid metabolism
Module
spwt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
N6H05_18380
00650 Butanoate metabolism
N6H05_18380
09103 Lipid metabolism
00071 Fatty acid degradation
N6H05_18380
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
N6H05_18380
00310 Lysine degradation
N6H05_18380
00380 Tryptophan metabolism
N6H05_18380
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
N6H05_18380
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
N6H05_18380
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N6H05_18380
00930 Caprolactam degradation
N6H05_18380
Enzymes [BR:
spwt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
N6H05_18380
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
N6H05_18380
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
N6H05_18380
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
DAO
F420_oxidored
2-Hacid_dh_C
Pyr_redox_2
Sacchrp_dh_NADP
XdhC_C
NAD_binding_8
UDPG_MGDP_dh_N
AlaDh_PNT_C
ApbA
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
WIA54987
LinkDB
All DBs
Position
3732794..3734971
Genome browser
AA seq
725 aa
AA seq
DB search
METIRFDIDADGIATLTIDVPGQSMNVIGPDFLADLDAAITRIASEEGIKGAVIASGKDS
GFMAGMDLKYFGSMLASADGQRPAPTAIFDNVFVLNQLFRRLETAGKPVACAIEGTCVGG
GFELALACHRRFVGDSPKTQLGLPEILIGLFPGGGGSQRLPRIMGVQASLMYMLQGKLFR
PAEAAMLKVVDGVVPQGTAAAAAKEWVKANPTASTQPWDVKGFKVPGGAGGFNPAFVQTM
AGALPMTLKQTQRNMNAPIALLSAVYEGITLPMDRAIRIESKYFAKVAADPQASNMIRTL
FVNKQAAERGARRPKDEPKAPTTKLAMLGAGMMGAGIATVAAQAGMDVVLFDRDQAYAEK
GKAHVEAVLAKRLGRGMTPEKMAATLARVTPTTDYAALAGADFVIEAVFEDVAIKAEVTK
QVEAVLGADTIFGSNTSTLPITKLANAWSKPENFIGVHFFSPVEKMPLVEIILGEKTGPA
AIAKALDFVAQIKKTPIVVHDSRGFYTSRSFGTYVQEGAELVGEGINPALIENAGKQLGM
PTGPLAVSDEVSIELGVKIMTAAKKELGDAYVPQGSDDIMLKMVEADRLGRKNGKGWYDY
PEGGKKHLSPVLGDLFPRADAQPDVEEVKERLLYRQLIECARCFEEGVLETPEDGDIGAI
FGWGFAPYTGGPFSHMDTVGIAHVVAVLDRLAAAHGPRFAPTAQLREMAANGATFYRPVP
SRAAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatccgcttcgacatcgatgccgacggcatcgccaccctgacgatcgacgtg
cccggccagtcgatgaacgtcatcggccccgacttcctggcagacctcgacgccgccatc
acccgcatcgcatcggaagaaggcatcaagggcgcggtcatcgcatcgggcaaggacagc
ggcttcatggccggcatggacctgaaatatttcgggtccatgctcgccagcgccgatggc
cagcgccccgcccccaccgcgatcttcgacaatgtgttcgtgctgaaccagttgttccgt
cgcctggaaaccgccggcaagccggtcgcctgcgccattgaaggcacctgcgtcggcggc
ggcttcgaactggcgctggcctgccatcgccgcttcgtcggtgacagccccaagacccag
ctgggcctgcccgaaatcctgatcggcctgttccccggcggtggcggatcgcagcgcctg
ccgcgcatcatgggcgtccaggcgtcgctgatgtacatgctgcagggcaagctgttccgc
ccggccgaagccgcgatgctgaaggtcgtcgacggcgtggtgccgcagggcacggcagct
gcggcggcgaaggaatgggtcaaggccaacccgaccgccagcacccagccctgggacgtc
aagggcttcaaggttcccggcggcgccggcggtttcaaccccgccttcgtccagaccatg
gccggcgccctgccgatgacgctcaagcagacccagcgcaacatgaacgcgccgatcgcc
ctgctgtcggcggtctatgagggcatcaccctgccgatggaccgggcgatccggatcgaa
agcaaatatttcgccaaggtcgccgccgatccgcaggcgtcgaacatgatccgcaccctg
ttcgtcaacaagcaggcagccgagcgcggcgcgcgccgtcccaaggacgagcccaaggcg
ccgaccaccaagctcgccatgctgggcgccggcatgatgggcgcgggcatcgccaccgtc
gcggcacaggccgggatggacgtggtgctgttcgaccgcgaccaggcctatgccgaaaag
ggcaaggcccatgtcgaggcggtgctggccaagcgcctgggccgtggcatgacgcccgag
aagatggccgctaccctggcccgcgtcaccccgaccaccgactatgccgcgctcgccggc
gccgacttcgtgatcgaagcggtgttcgaggatgtcgcaatcaaggcggaagtgaccaag
caggtcgaagccgtgctgggcgccgacaccatcttcggttccaacacctcgaccctgccg
atcaccaagctggccaatgcctggtccaagcccgagaatttcatcggcgtccacttcttc
tcgccggtcgagaagatgccgctggtcgaaatcatcctgggtgaaaagaccggcccggcc
gcgatcgccaaggcgctcgacttcgttgcccagatcaagaagacgccgatcgtcgtccat
gacagccgcggcttctacacctcgcgcagcttcggcacctatgtgcaggaaggtgcggag
ctggtcggcgaaggcatcaacccggcgctcatcgaaaatgccggcaagcagctcggcatg
ccgaccggcccgctggccgtcagcgacgaagtgtcgatcgaactgggcgtcaagatcatg
accgccgccaagaaggagctgggcgacgcctatgttccccaggggtcggacgacatcatg
ctcaagatggtcgaggccgatcgcctgggccgcaagaacggcaagggctggtacgactat
cccgaaggcggcaagaagcatctctcgccggtgctgggcgatctgttcccgcgcgccgac
gcccagccggacgtcgaggaagtcaaggaacgcctgctctatcgccagttgatcgaatgc
gcccgctgcttcgaggaaggcgtactcgaaacgccggaagatggcgacatcggcgcgatc
ttcggctggggcttcgcgccctataccggtggtccgttcagccatatggacacggtcggc
atcgcccatgtcgtggccgtgctggatcggctggccgccgcccatggcccgcgcttcgcc
cccacggcgcagttgcgggaaatggcggccaacggcgcgaccttctatcgccccgttccg
tctcgcgctgcagcatga
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