Sphingobium sp. WTD-1: N6H05_18630
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Entry
N6H05_18630 CDS
T10837
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00020
Citrate cycle (TCA cycle)
spwt00640
Propanoate metabolism
spwt00660
C5-Branched dibasic acid metabolism
spwt00720
Other carbon fixation pathways
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
spwt01120
Microbial metabolism in diverse environments
spwt01200
Carbon metabolism
Module
spwt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spwt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N6H05_18630 (sucC)
00640 Propanoate metabolism
N6H05_18630 (sucC)
00660 C5-Branched dibasic acid metabolism
N6H05_18630 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
N6H05_18630 (sucC)
Enzymes [BR:
spwt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
N6H05_18630 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
WIA55034
LinkDB
All DBs
Position
complement(3779533..3780732)
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKYGAPIAAGHAAFTVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK
ELAPEAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYL
ALLVDRATSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPATGFQPHHGRAVAAALGLT
GDLAKQASKVAASLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA
ELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG
GGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIANGIVEAAKEVNLSVPLVVRLE
GTNVQQGKDILANSGLPIVPADDLGDAAKKIVAEVRKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaatatcaagcgaaggaactgctcgccaagtatggcgcgccgatcgcc
gccggtcacgccgccttcaccgtcgaggaagccgtcgaggctgccaagaagctgcccgga
ccgctctatgtcgtgaagtcgcagatccacgccggtggccgcggcaagggcaagttcaag
gaactggcccccgaagccaagggcggcgtccgcctcgccttcaacctggacgaggtgaag
gcccacgccaccgacatgctcggcaacacgctggtcaccatccagaccggcgaagccggc
aagcaggtcaaccgtctgtacatcaccgacggcgccgacattgccaaggaattctatctg
gcgctgctggtcgatcgcgccaccagccgcatcgctttcgtcgtgtcgaccgaaggcggc
atggacattgaagaggtcgctcactcgacccccgaaaagatccacagcttctcggtcgat
ccggccaccggcttccagccgcaccacggccgcgccgttgccgctgccctaggcctgacc
ggcgacctcgccaagcaggcttcgaaggttgccgcgtcgctctacgccgcgttcctcgac
accgacgccgagcagatcgaagtcaacccgctggcgctgaccgagcagggaaacctcctc
gtcctcgacgccaaggtcggtttcgacggcaatgccatgttccgtcacaaggacatcgcc
gaactgcgcgacctgaccgaggaagatgcggccgaagtcgaagcgtcgaagtacgacctg
gcttacatcaagctcgacggtaacatcggctgcatggtgaacggcgctggcctggccatg
gcgaccatggacatcatcaagctgaacggcgaattccccgccaacttcctggacgtgggt
ggcggcgccaccaccgagaaggtgaccgcagcgttcaagatcatcctgaaggacccggcc
gttaagggcattctggtcaacatcttcggcggcatcatgaagtgcgacatcattgccaat
ggcatcgtcgaagctgccaaggaagtgaacctgtcggttccgctggttgtccgcctcgaa
ggcaccaacgtccagcagggcaaggacattctggccaattcgggtcttccgatcgttccc
gctgacgacctgggcgatgcggccaagaagatcgtggcagaagtgaggaaggcggcctga
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