KEGG   Sphingobium sp. WTD-1: N6H05_19070
Entry
N6H05_19070       CDS       T10837                                 
Name
(GenBank) LacI family DNA-binding transcriptional regulator
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
spwt  Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:spwt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:spwt03000]
    N6H05_19070
Transcription factors [BR:spwt03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    N6H05_19070
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 TetR_N HTH_Tnp_ISL3 MarR_2 HTH_Crp_2 HTH_38 HTH_3 HTH_17 HTH_23 HTH_29 HTH_24 HTH_28 Sigma70_r4 HHH_5 Sigma54_DBD HTH_Tnp_Tc3_2_like HTH_AsnC-type HTH_5 MarR HTH_7 TnsD
Other DBs
NCBI-ProteinID: WIA55113
LinkDB
Position
complement(3856798..3857847)
AA seq 349 aa
MTKTPRDEGAIAKLTINDIARMAGVSKKTVSRVINRSPLLNQETRGKVEEIIRQTGYVPN
PQARALALGRNFLIGLIYDNPNAQMVLSMQKGILEALHGTEFELVVRPVDRGAAMVMEDI
HNFVTRQRLFGVVVLPPLSENDSLSKLFDDAGCRYVRMGSALLDDPEHMVASNDRDAVAD
AVRYLIAQGHRRIGLIAGPHGFRSAKERREGFEMALAEAGISLPRSLVADGQYTFESGVS
ASENLFDLTSPPTAIFASNDEMAAGVLYAARLRGIEVPEQLSIIGFDDTPLTTRVWPPLT
TVRWPIAAMGRAAALKLIGTAIGEEAEVSEPSLFSSTLIRRSSVAPASG
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgacaaagacacccagggacgagggcgccatcgccaagctgacgatcaacgacattgcc
cgcatggccggcgtgtcgaagaagacggtcagccgcgtcatcaaccgatcgccgctgctg
aaccaggaaacccgcggcaaggtggaggaaatcatccgccagaccggctatgtccccaat
ccgcaggcacgcgcgctggcgctggggcgcaatttcctgatcggcctgatctacgacaat
cccaatgcccagatggtgctcagcatgcagaaggggatattggaggcgctgcacggcacc
gagttcgagctggtggtgcgcccggtggacaggggggcggcgatggtgatggaggacatc
cataacttcgtgacgcgccagcgcctgtttggcgttgtcgtgctgccgccgctctccgaa
aatgacagtctttccaagctgttcgatgatgctggctgtcgctatgtgcgcatgggttcg
gctttgctcgacgatccggagcatatggtcgcctccaatgaccgcgacgcggtggccgat
gcggtgcgctatctgatcgcgcaggggcatcggcggatcggcctgatcgccgggccgcat
ggcttccgttccgccaaggaacggcgcgagggctttgaaatggcgctggcggaagccggc
atcagcctgccgcgcagcctggtcgcagacggacaatatacttttgaatcaggggtttcg
gcgtccgaaaacctgtttgacctcacctccccgccgaccgcgatctttgccagtaatgac
gagatggcggcaggtgtcctctatgcggcgcggctgcgcgggatcgaagtgccggagcaa
ttgtcgatcatcggcttcgacgatacgccgctcaccacccgcgtctggccgccgttgacc
acggtgcgctggccgatcgcggccatgggccgcgccgccgcactcaagctgatcggcact
gccatcggcgaggaggcggaggtcagcgagccgtcgctgttcagttcgaccctgatccgg
cgcagttcggtggcgcctgcatcgggctga

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