Sphingobium sp. WTD-1: N6H05_19070
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Entry
N6H05_19070 CDS
T10837
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spwt03000
]
N6H05_19070
Transcription factors [BR:
spwt03000
]
Prokaryotic type
Helix-turn-helix
LacI family
N6H05_19070
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_Tnp_ISL3
MarR_2
HTH_Crp_2
HTH_38
HTH_3
HTH_17
HTH_23
HTH_29
HTH_24
HTH_28
Sigma70_r4
HHH_5
Sigma54_DBD
HTH_Tnp_Tc3_2_like
HTH_AsnC-type
HTH_5
MarR
HTH_7
TnsD
Motif
Other DBs
NCBI-ProteinID:
WIA55113
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Position
complement(3856798..3857847)
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AA seq
349 aa
AA seq
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MTKTPRDEGAIAKLTINDIARMAGVSKKTVSRVINRSPLLNQETRGKVEEIIRQTGYVPN
PQARALALGRNFLIGLIYDNPNAQMVLSMQKGILEALHGTEFELVVRPVDRGAAMVMEDI
HNFVTRQRLFGVVVLPPLSENDSLSKLFDDAGCRYVRMGSALLDDPEHMVASNDRDAVAD
AVRYLIAQGHRRIGLIAGPHGFRSAKERREGFEMALAEAGISLPRSLVADGQYTFESGVS
ASENLFDLTSPPTAIFASNDEMAAGVLYAARLRGIEVPEQLSIIGFDDTPLTTRVWPPLT
TVRWPIAAMGRAAALKLIGTAIGEEAEVSEPSLFSSTLIRRSSVAPASG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacacccagggacgagggcgccatcgccaagctgacgatcaacgacattgcc
cgcatggccggcgtgtcgaagaagacggtcagccgcgtcatcaaccgatcgccgctgctg
aaccaggaaacccgcggcaaggtggaggaaatcatccgccagaccggctatgtccccaat
ccgcaggcacgcgcgctggcgctggggcgcaatttcctgatcggcctgatctacgacaat
cccaatgcccagatggtgctcagcatgcagaaggggatattggaggcgctgcacggcacc
gagttcgagctggtggtgcgcccggtggacaggggggcggcgatggtgatggaggacatc
cataacttcgtgacgcgccagcgcctgtttggcgttgtcgtgctgccgccgctctccgaa
aatgacagtctttccaagctgttcgatgatgctggctgtcgctatgtgcgcatgggttcg
gctttgctcgacgatccggagcatatggtcgcctccaatgaccgcgacgcggtggccgat
gcggtgcgctatctgatcgcgcaggggcatcggcggatcggcctgatcgccgggccgcat
ggcttccgttccgccaaggaacggcgcgagggctttgaaatggcgctggcggaagccggc
atcagcctgccgcgcagcctggtcgcagacggacaatatacttttgaatcaggggtttcg
gcgtccgaaaacctgtttgacctcacctccccgccgaccgcgatctttgccagtaatgac
gagatggcggcaggtgtcctctatgcggcgcggctgcgcgggatcgaagtgccggagcaa
ttgtcgatcatcggcttcgacgatacgccgctcaccacccgcgtctggccgccgttgacc
acggtgcgctggccgatcgcggccatgggccgcgccgccgcactcaagctgatcggcact
gccatcggcgaggaggcggaggtcagcgagccgtcgctgttcagttcgaccctgatccgg
cgcagttcggtggcgcctgcatcgggctga
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