Sphingobium sp. WTD-1: N6H05_19200
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Entry
N6H05_19200 CDS
T10837
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_19200
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_19200
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
Motif
Other DBs
NCBI-ProteinID:
WIA55139
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All DBs
Position
complement(3888446..3889471)
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AA seq
341 aa
AA seq
DB search
MRKLALAAALATSALATPALARDNSWYVGVDAGVLLVEDQDLTFSSIPPGGSTVPSIDYH
KGYDFDANIGYDFGGFRLEAEAAYKRAKIDFDKTGGGFGGAASALSFMLNGLLDFGPDDG
LQGFVGGGVGVSRGKLASDIVNDSDTGFAWQAIAGVRYPVTNNVDISLKYRYFNQDDIKL
IPAYQSIYGQAGSEADTKLRTHSLLLGITYNFGEPAAPPPPPAPECSPGPYIVFFEWDKS
DITPDAATILDNAVSAYSACGNAQVMLAGHADRSGAASYNVGLSQRRADAAKAYLASKGI
PDGVMTTQAFGESKPRVDTADGVREVQNRRVEITYGPGSGQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccctcgcggctgcgcttgcgaccagtgccctggccaccccggccttg
gcgcgcgacaatagctggtatgttggcgtagacgccggcgtgctgctggtcgaagatcag
gacctgaccttctcttccatcccgccgggtggttcgaccgttccttcgatcgactaccac
aagggttatgacttcgacgccaatatcggctacgacttcggtggcttccgcctcgaagcc
gaagccgcctacaagcgtgcgaagatcgacttcgacaagaccggtggtggcttcggtggc
gccgcttcggcactctcgttcatgctgaacggcctgctcgacttcggtcccgatgatggc
ctgcagggcttcgtcggcggcggcgtcggcgtgtcgcgtggcaagctcgccagcgacatc
gtgaacgacagcgataccggtttcgcctggcaggcgatcgccggcgtgcgttatccggtc
accaacaatgtcgatatctcgctgaagtatcgctacttcaaccaggacgacatcaagctg
atcccggcttaccagagcatctacggtcaggctggttcggaagccgataccaagctgcgt
acccacagcctgctgctgggcatcacctacaacttcggtgaaccggctgctccgccgccc
ccgccggcgccggaatgctcgcctgggccgtacattgtcttcttcgaatgggacaagtcg
gacatcacgcctgacgccgccaccattctggacaacgcggtttcggcctacagcgcttgc
ggcaacgcccaggtcatgctggccggtcacgctgaccgttcgggtgcagcctcgtacaac
gttggtctgtcgcagcgtcgcgctgacgccgccaaggcttatctcgcctcgaagggtatc
cctgacggcgtgatgaccactcaggccttcggtgaatcgaagccgcgcgtcgacaccgcg
gacggcgttcgcgaggtccagaaccgtcgcgtggaaatcacctacggtccgggttcgggt
cagtaa
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