Sphingobium sp. WTD-1: N6H05_21540
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Entry
N6H05_21540 CDS
T10837
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_21540
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_21540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WIA55577
LinkDB
All DBs
Position
complement(4332456..4334576)
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AA seq
706 aa
AA seq
DB search
MPFPAIFSTRAHLLGGAALIGALALPVAAQAQAPDADAQSSAIVVTAAGYEQNIIEAPAS
ITVLGREELQEKRFGSLAEALQDVQGVDVGGEAGKTGGLNISIRGMPSDYTLVLIDGRRQ
NAPGGVTPNGFGETSTSFLPPFSAIDRIEVVRGPMSTLYGSDAMGGVVNIITRKVGDRWV
GTATAESTIQGDDRFGNIQSVNGFAQGPIIKGLAGLTLRGSIFHRAGSDIEIPGDPALTL
GRNPVESDIYNYGGRLTLTPHADHDLWFEYDRNEQSYDNSRGQLGTLGSGGYAPEQRFNR
SNYVIAHSWRMGFGQLDTTLTRNETETIGRLIPNGTPGAVPGSPRTLEARNDIIDSRFAG
KVGAIAFTVGGQYWKARMVEGVAPEPFKFTQWAGFAEATLTVTNGFNITGGARYDNHSTF
GDKWSPRAYAVWNINDALTLKGGVSRGFKTPRVEQIAEGIIGFGGQGRIPLLGTPGLKPE
TSTSYEAGLYYDGDGFFSGNVTLFNNDFTDKIASGPGIPNCQFSGNPNRPGCLDVGPFPT
VDLFSQSINIDKARTRGVEVATRFALTPALSLTANYTYTETEQLSGAEEGLPLIGMPKHM
LNGNLRWKLGDKASVWTRAEIRSSRYRGANAQQSAVGDFRSYEVFHLGGSYQIAPAFRLS
ATLYNILDTDYAVYVPYQTGTTTAWTPAYSINPEGRRLWLSATVDF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccatttcctgcaatcttctcgacgcgtgcccatctgctggggggcgctgccctgatc
ggtgcgctggcgctgcccgtcgcggcgcaggcgcaggcgcccgatgccgatgcgcagtcg
agcgcgatcgtcgtcaccgcggccggctatgaacagaatatcatcgaggcaccggccagc
atcaccgtgctgggccgcgaggaattgcaggaaaagcggttcggcagcctggccgaagcg
ctgcaggatgtgcagggcgtcgatgtcggcggcgaagcgggcaagaccggcggcctcaac
atctcgatccgcggcatgcccagcgactatacgctggtgctgatcgacggccggcgccag
aatgcgcccggcggcgtcacgcccaacggctttggcgaaacctccaccagcttcctgccg
cccttctccgcgatcgaccggatcgaggtggtgcgcggcccgatgtccaccctctatggc
tcggacgcgatgggcggcgtcgtcaacatcatcacccgcaaggtcggcgatcgctgggtc
ggcaccgccaccgccgaaagcacgatccagggcgatgaccgcttcggcaatatccaatcg
gtcaacggctttgcccaggggccgatcatcaaggggctggccggcctgaccctgcggggc
agcatcttccaccgcgccggatccgacatcgagatccccggcgatccggcgctgaccttg
ggccgtaacccggtggaatccgacatctataattatggcggccggctgacgctgacgccc
catgccgatcatgacctgtggttcgaatatgatcgcaacgaacaaagctatgacaatagc
cggggccagctcggcacgctggggtcgggcggctatgcccccgaacagcggttcaaccgc
agcaactatgtgatcgcgcatagctggcgcatgggcttcggccagctcgacaccaccctg
acccgcaacgagactgaaacgatcggccgcctgatccccaatggcacgccgggcgcggtg
ccgggcagcccgcgcacgctggaggcgcgcaacgacatcatcgattcccgctttgccggc
aaggtcggcgcgatcgccttcaccgtcggcggccaatattggaaggcgcggatggtcgag
ggcgtggcgcccgagccgttcaagttcacccaatgggcgggctttgccgaagcgacgctg
accgtgaccaacggcttcaacatcaccggcggcgcgcgctatgacaatcactcgaccttc
ggcgacaaatggtcgccgcgcgcctatgcggtgtggaacatcaatgatgcgctgaccctg
aagggcggcgtcagccgcggcttcaagacgccacgcgtcgaacagattgccgagggtatc
atcggctttggcgggcaggggcgcatcccgctgctcggcacgccggggctgaagccggaa
accagcaccagctatgaagcaggcctctattatgatggcgacggcttcttcagcggcaat
gtcaccctgttcaacaatgacttcaccgacaagatcgccagcggtccgggcatccccaac
tgccagttttcaggcaatcccaatcgccccggctgtctggatgtcggcccgttcccgacc
gtcgacctgttcagccagtcgatcaacatcgacaaggcccgcacccgcggcgtcgaggtg
gcaacccgtttcgccctgacgcccgccctgtcgctgacggccaactatacctataccgag
accgagcagctgagcggcgcggaagaggggctgccgctgattggcatgcccaagcatatg
ctgaacggcaatctgcgctggaagctgggtgacaaggcgagcgtctggacccgcgccgaa
atccgctccagccgttatcgcggcgccaatgcgcaacagagcgccgtgggcgacttccgc
agctatgaagtcttccacctgggcggttcctaccagatcgcgccggccttccgcctgtcg
gcgacgctctacaacatcctcgacaccgactatgcagtctatgtgccctatcagaccggc
acgacgaccgcctggaccccggcctattcgatcaacccggaagggcgccgcctctggctt
tcggccacggtcgacttctga
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