Sphingobium sp. WTD-1: N6H05_21670
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Entry
N6H05_21670 CDS
T10837
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6H05_21670 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spwt03019
]
N6H05_21670 (groL)
03110 Chaperones and folding catalysts [BR:
spwt03110
]
N6H05_21670 (groL)
03029 Mitochondrial biogenesis [BR:
spwt03029
]
N6H05_21670 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spwt04147
]
N6H05_21670 (groL)
Enzymes [BR:
spwt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N6H05_21670 (groL)
Messenger RNA biogenesis [BR:
spwt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N6H05_21670 (groL)
Chaperones and folding catalysts [BR:
spwt03110
]
Heat shock proteins
HSP60 / Chaperonin
N6H05_21670 (groL)
Mitochondrial biogenesis [BR:
spwt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N6H05_21670 (groL)
Exosome [BR:
spwt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N6H05_21670 (groL)
Exosomal proteins of other body fluids (saliva and urine)
N6H05_21670 (groL)
Exosomal proteins of breast cancer cells
N6H05_21670 (groL)
Exosomal proteins of colorectal cancer cells
N6H05_21670 (groL)
Exosomal proteins of bladder cancer cells
N6H05_21670 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WIA55602
LinkDB
All DBs
Position
complement(4364377..4366020)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVAKVVEDIQSRSKPVAGSAEVAQVGIISANGDKEVGEKIAEAMEKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMAVELADPYILIHEKKLSNLQSILPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
ISEDLGIKLENVTLGMLGTAKRVTIDKDNTTIVDGAGDADSIKGRTEQIRAQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKVLEGVAGANDDQTRGIDIVRKSLTALVRQIAANAGHDGAVVSGKLLDQTDTSFGFN
ASTDTYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPEDKPAMPAMPGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggacgtaaagttttcgcgtgacgctcgtgagcgcatcctgcgcggcgtc
gacatcctggccgacgcggtcaaggtgaccctgggcccgaagggccgcaacgtcgtcatc
gacaagagcttcggcgctccccgcatcaccaaggacggcgtcagcgtcgccaaggaaatc
gaactgaaggacaagttcgagaatatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgttctggctcaggccatcgtg
cgcgaaggcatgaagtcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgtcgccaaggttgtcgaggacatccagtcgcgttcgaagccggttgccggt
tcggccgaagtggcccaggtcggcatcatctcggccaatggcgacaaggaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagaggcc
aagggtctcgacttcgagctggacgttgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaccaacccggaaaagatggctgtcgagctggctgatccgtacatc
ctgatccacgagaagaagctctcgaatctgcagtcgatcctgccgatcctggaagccgtg
gtgcagtcgggccgtccgctcctcatcatcgccgaggacattgaaggcgaagcgctggcg
accctggtcgtcaacaagctgcgcggcggcctgaaggttgctgcggtcaaggcaccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccgtcctgaccaagggcgaagtg
atctcggaagacctgggcatcaagctcgaaaacgtcaccctgggcatgctgggcaccgcc
aagcgcgtcaccatcgacaaggacaacaccaccatcgtcgatggcgccggtgatgccgac
tcgatcaagggccgtaccgagcagatccgtgcgcagatcgaagtcaccacttcggactat
gaccgtgaaaagctgcaggaacgcctggccaagctggctggcggcgttgccgtcatcaag
gttggcggtgcgaccgaagtcgaagtgaaggagcgcaaggatcgcgtcgacgacgccctg
cacgcgacccgcgctgccgtcgaagaaggcatcgtccccggtggcggtaccgcgctgctc
tacgcgaccaaggttcttgaaggcgtcgctggcgccaatgacgaccagacccgcggcatc
gacatcgtccgcaagtcgctgaccgcgctggttcgccagatcgccgccaacgccggccat
gacggtgctgtcgtctcgggcaagctgctcgaccagaccgacacctcgttcggcttcaac
gcgtcgaccgacacctatgaaaacctggttgccgctggcgtcatcgacccgaccaaggtc
gtgcgcaccgcgctccagaacgctgcctcggttgctggtctgctgatcaccaccgaagcc
gcggtttcggaactgcccgaagacaagcccgccatgcccgccatgccgggtggcatgggc
ggcatgggcggcatggacttctaa
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