Sphingobium sp. WTD-1: N6H05_22365
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Entry
N6H05_22365 CDS
T10837
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spwt03009
]
N6H05_22365
Enzymes [BR:
spwt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
N6H05_22365
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
N6H05_22365
Ribosome biogenesis [BR:
spwt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
N6H05_22365
23S rRNA modification factors
N6H05_22365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_11
THF_DHG_CYH_C
B-CoV_A_NSP1
Motif
Other DBs
NCBI-ProteinID:
WIA55733
LinkDB
All DBs
Position
complement(4500946..4501683)
Genome browser
AA seq
245 aa
AA seq
DB search
MAKIRADQLLVDNGLAESRARAQALILAGLVYLGDKKVEKAGQQVPDDAEMDVRGRDHPW
VSRGGIKLAHAIDEYGIDVTGFVAIDVGSSTGGFTDVLLSKGAAKVYAVDSGTNQLAWKL
RSDDRVIVHEQTSARILTDAHITEPVDIIVCDASFISLAKVLEKPIGFARPGAQLVALIK
PQFEAGREEVGKGGVVRDPAIHQRVCDEVAAWVREKGWEVLGITTSPITGPQGNVEFLIH
ARLGG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccaagattcgtgccgaccagttgctcgtcgacaatggccttgcggaaagccgggcg
cgggcgcaggcgcttattctcgccggcctggtctatctgggcgacaagaaggtcgagaag
gcggggcagcaggtgcccgacgatgccgagatggacgtgcgcgggcgcgaccatccctgg
gtctcgcgcggcggcatcaagctcgctcatgcgattgacgaatatggcatcgacgtcacc
ggctttgtcgcgatcgacgtcggcagctcgaccggcggcttcaccgacgtgctgctgagc
aagggcgcggccaaggtctacgcggtcgacagcggcactaaccagctcgcctggaagctg
cgctccgacgatcgcgtcatcgtccatgaacagaccagcgcccgcatcctgaccgacgcc
catataaccgagccggtcgacatcatcgtgtgcgacgccagcttcatcagcctggccaag
gtgctcgaaaagccgatcggcttcgcccggcccggcgcgcagctggtcgccctcatcaag
ccgcagttcgaggcagggcgcgaggaagtgggcaagggcggggtagtgcgcgatcccgcc
atccaccagcgcgtctgcgacgaagtcgctgcctgggtccgtgagaagggctgggaagtg
cttggaatcacgaccagtccgatcaccgggccacagggcaatgtcgaatttctgattcat
gcacggcttggcggataa
DBGET
integrated database retrieval system
