Sphingobium sp. WTD-1: N6H05_23990
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Entry
N6H05_23990 CDS
T10837
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_23990
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_23990
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WIA56041
LinkDB
All DBs
Position
complement(4832338..4834182)
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AA seq
614 aa
AA seq
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MKMLGISLIALLAATPALAQDDDIVVTASGIAQPRDEVGQAITVIDADTIRTRQAVDVVD
LLATTPGVRFSRNGSTGGVTGVSLRGAETTQTLVLIDGVKVNDPSGIGDGYDFGHLLTGN
IRRIEVLRGSNSVVYGSQAIGGVVNVMTGAPSEGFEVNASADYGYSDTLNAKADVSGTRG
AVSGGVGVAYFNTDGISSVGRSFGGVEKDGYENIATNAKLKIAFSDTLSLDLRGYYIHAD
LDYDSFFGAPADSSDVSKLDQYVGYAGINLALLDGKLTNRAAVTWLRNDRDYYFVRGTDP
DYGYSGTNLRFEYEGVYAPVDQAKLIFGYEHERPDYEYFGFGDIASAKANIDSVYALAVV
KPLTGLAVTGGLRHDDHSQFGGATTFGANANYTPNAGATNIRLSYGEGFKAPSLYQLYDT
YSGNSALRPERSKSYDIGFDQSLDGDKAVLSLTAFRRDTRNQINYDYATYTYGNLDRTRA
KGVEATLTLKPVEALTVAASYSYVDARDRSGGATDGNRLPRRAANAVSLSADYLWAFGLS
TGATLTMVGDSYDDTANTRRLDGYALAGLRASFPVGAHLEVYGRIDNLFDADYATAYGYG
TYGRSAYGGVRVRF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttggggatttcgctgatcgcattgctggccgctacgccggcactggcccag
gatgacgatatcgtcgtcaccgcttcgggcatcgcacagccgcgcgacgaggtcggccag
gcgatcacggtgatcgatgccgacacgatcaggacgcgccaggcggtcgatgtcgtcgac
ctgctcgccaccacgccgggcgtccgcttcagccgcaacggctccaccggcggcgtgacc
ggcgtgtcgctgcgcggcgcggagacgacccagacgctggtgctgatcgacggggtcaag
gtcaacgacccgagcggcatcggcgacggctatgatttcggtcatttgctgaccggcaat
atccgccggatcgaagtgctgcgtggctccaactcggtggtctatggcagccaggcgatc
ggcggcgtggtcaatgtgatgaccggcgcgccgagcgagggtttcgaggtcaatgcctcg
gccgactatggctatagcgacacgctcaacgccaaggccgatgtgtcgggcacgcgtggc
gcggtgtcgggcggcgtcggcgtcgcctatttcaacaccgacggcatttcctcggtcggc
cggtccttcggcggcgtggagaaggacggctatgagaatatcgccaccaacgccaagctg
aagatcgccttttccgacactctgagcctcgacctgcgcggttattatatccatgccgat
ctcgactatgacagcttcttcggcgcgccggccgacagcagcgacgtcagcaagctggac
caatatgtcggctatgccgggatcaacctggcgctgctcgacggcaagctgaccaaccgc
gccgccgtcacctggctgcgcaacgatcgcgactattatttcgtgcgcggcaccgacccg
gactatggctattcgggcaccaatctgcgcttcgaatatgaaggcgtctatgccccggtg
gatcaggccaagctgatcttcggctatgagcatgagcggccggactatgagtatttcggc
tttggcgacatagcgagcgcgaaggcgaacatcgacagcgtctatgcactggcggtggtg
aagccgctcaccggcctcgccgtcaccgggggcttgcgccatgacgatcatagccagttc
ggcggcgcgaccacctttggcgctaacgccaattacacgccgaacgccggcgcgaccaat
atccgcctctcctatggcgaggggttcaaggcgccgtccctttatcagctctacgacact
tatagcggcaacagcgcgctgcggccggagcgctcgaaaagctatgatatcggcttcgac
cagagcctggacggggacaaggcggtgctgtcgctgaccgccttccggcgcgatacccgc
aaccagatcaactatgactatgcgacctacacctatggcaatctggaccggacccgcgcc
aagggcgtggaagcgacgctgacgctgaagccggtcgaggcgctgacggtggcggcctcc
tacagctatgtcgatgcgcgcgaccggtcgggcggagccaccgacggcaatcgcctgccg
cgccgcgccgccaatgcggtcagcctgtcggccgactatctctgggccttcggcctgtcg
accggcgcgaccctgaccatggtcggcgacagctatgacgacacggccaacacccgccgg
ctcgacggctatgcgctggctggtctgcgcgcgtccttcccggtgggcgcgcatctggaa
gtctatggccggatcgacaatctgttcgatgcggattacgccaccgcctatggctatggc
acctatggccggtcggcctatggcggcgtgcgtgtccgcttctaa
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