Sphingobium sp. WTD-1: N6H05_24475
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Entry
N6H05_24475 CDS
T10837
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N6H05_24475 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spwt01007
]
N6H05_24475 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spwt03016
]
N6H05_24475 (trpS)
Enzymes [BR:
spwt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
N6H05_24475 (trpS)
Amino acid related enzymes [BR:
spwt01007
]
Aminoacyl-tRNA synthetase
Class I (G)
N6H05_24475 (trpS)
Transfer RNA biogenesis [BR:
spwt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N6H05_24475 (trpS)
Prokaryotic type
N6H05_24475 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
TraI_C
Motif
Other DBs
NCBI-ProteinID:
WIA56131
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All DBs
Position
complement(4934967..4935971)
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AA seq
334 aa
AA seq
DB search
MRVLSGIQPTGNLHLGNYLGAIRNWVRMQDEMDEGSQCFFFLADMHSITVHEGREQRIRN
VRDMAAALVASGIDPDRSVLFNQARVPAHAELAWLLNGTARIGWLNRMTQFKDKAGKDRE
GASVGLFVYPVLQAADILLYQATHVPVGEDQKQHLELSRDIATKFNTDFGADVFTLPAPI
IPKESARIMSLRDGTAKMSKSDPSDLSRINLTDEDDAIMTKVKKAKTDPEPLPETAEGLA
GRPEATNLIGIYATLSNSTPDAVCAQFAGKGFGAFKPALGELLVETLRPMRERFVELRTD
DAALDAILDKGAAKAAAAAEPTLRAAYDAMGLMR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctttccggcatccagcccaccggcaatctgcaccttggcaactacctcggc
gcgatccgcaactgggtgcggatgcaggacgagatggatgaaggcagccagtgcttcttc
ttcctcgccgacatgcactcgatcaccgtgcatgaagggcgcgagcaacgcatccgcaac
gtgcgcgacatggccgccgccctggtcgcctcgggcatcgatccggatcgctcggtcctc
ttcaaccaggcccgcgtgccggcccatgccgaactcgcctggctgcttaacggcaccgcc
cgcatcggctggctcaaccgcatgacccagttcaaggacaaggcgggcaaggaccgcgag
ggcgcctcggtcggcctgttcgtctatccggtgctgcaggccgccgacatcctgctctat
caggcgacccatgttcccgtgggcgaggaccagaagcagcatctggagctgtcgcgcgac
atcgccaccaagttcaacaccgacttcggcgctgatgtcttcaccttgccggccccgatc
atccccaaggaatcggcgcgcatcatgtcgctgcgcgacggcacggcgaaaatgtccaag
tccgacccctcggacctgagccgcatcaacctcaccgacgaggatgatgcgatcatgacc
aaggtgaagaaggccaagaccgaccccgaaccgctgcccgaaacggcagagggcctggcc
ggtcgtccggaagcgaccaacctcatcggcatctacgccaccctgtcgaacagcacgcct
gacgcggtttgcgcgcagttcgccggcaagggcttcggcgcgttcaagccggcgctgggc
gagttgctggtggaaacgctgcggccgatgcgtgaacgtttcgtggaactgcgcactgac
gatgctgcgctcgacgcgatcctggacaagggcgcggccaaggcggcggcggcagccgag
ccaaccctgcgtgcggcctatgacgccatgggcctgatgcgctga
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