Sphingobium sp. WTD-1: N6H05_26340
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Entry
N6H05_26340 CDS
T10837
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00071
Fatty acid degradation
spwt00362
Benzoate degradation
spwt00650
Butanoate metabolism
spwt01100
Metabolic pathways
spwt01120
Microbial metabolism in diverse environments
spwt01200
Carbon metabolism
spwt01212
Fatty acid metabolism
Module
spwt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
N6H05_26340
09103 Lipid metabolism
00071 Fatty acid degradation
N6H05_26340
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N6H05_26340
Enzymes [BR:
spwt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
N6H05_26340
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
DAO
NAD_binding_2
Pyr_redox_2
NAD_binding_8
GIDA
F420_oxidored
UDPG_MGDP_dh_N
2-Hacid_dh_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
WIA58835
LinkDB
All DBs
Position
unnamed1:complement(241812..244163)
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AA seq
783 aa
AA seq
DB search
MSEQAIKPVGAPPETIKKVCVIGAGVMGAGIAAQVANAGVPVLLLDIVPKEGGDRDAVAK
GAVAKMLKTDPAPFMSKAAAKLVETGNIDDHLERVAECDWIVEAIVERLDIKQALYAKLE
QLKRPGTAVSSNTSTIPLGHLVEGRDDQFKQDFLITHFFNPPRYMRLIEIVTGPDTDTAV
ARRVSDFVDRKLGKRIVPARDTPGFIANRIGTYWLAVAINAAMDQGLTVEEADQIGGKPM
GVPKTGIFGLVDLVGVDLMPLLTKSLSSTLPAGDAYFDTVRPMPLVDRMIAEGFTGRKGK
GGFYAFDKATKTKKALDLATGEYRVSVKPASLPGRAEKDLAALVAAPGKVGAYAWEILGK
VLSYAASLVGEAADNIVGIDDAMKLGYNWKFGPFELIDRLGPGKLAERLAAEGRDVPAIL
KVAGDRPFYRVQDGRRQYLDAAGDYHDVVRPEGVLLLEDIKLHSQPILKNGSAALWDVGD
GVACLEFTGKMNALDGDVMKLIGQAIPVVQDKFKALVVYNEGSNFSAGANLGLALFALNI
AAWGEIEKLVAGGQQAYKALKYAPFPVVSAPAGMALGGGCEILLNSDAVQAHAESYVGLV
ECGVGLIPGWGGCGEMIDRWRSSPGMPKGPMPAVAKVFETVSTATVAKSAAEAKEHGFLR
PSDGITMNRDRLLADAKAKALELADGYKPPVAPEFRLPGAGGKSALSMAVEGFQARGLAT
SYDGVVSGALADVLTGGEKDLIDIVTEEDLLALERKAFMQLVRDPRTQARVEQMLVTGKP
LRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggccatcaagccagtcggcgccccgccggaaaccatcaaaaaggtctgc
gtgatcggcgcaggcgtcatgggcgccggcatcgcagcgcaggtcgccaatgccggcgtg
ccggtgctgctgctcgatatcgtgcccaaggagggcggcgatcgtgacgccgtggcgaag
ggtgcggtcgcgaagatgctgaagaccgatccggcgcccttcatgtcgaaggctgcggcg
aagctcgttgaaacgggcaatatcgacgaccatctcgagcgggtggccgaatgcgactgg
atcgtcgaggcgatcgtcgaacggctcgacatcaagcaggcgctctacgccaagctcgag
cagctcaagcgtccgggcacggcggtatcgtccaatacctcgacgattccgcttggccat
ctggtcgaggggcgggacgatcagttcaaacaggacttcctgatcacccatttcttcaat
ccgccgcgctacatgcggctcatcgaaatcgtgaccggccccgacactgatacggctgtg
gcgaggcgcgtctcggatttcgtcgatcgaaagctcggcaagcgcatcgtgccggcgcgg
gacacgccgggcttcatcgccaatcgcatcggtacctactggctggccgtcgcgatcaat
gccgcgatggaccaggggctgacggtggaggaagccgaccagatcggcggaaagccgatg
ggcgtgcccaagaccggcattttcggccttgtcgatctcgttggcgtcgacctcatgccg
ctgctcacgaagagcctgtcctcgacgctgccggcaggtgacgcctatttcgacacggtg
aggccgatgccgctcgtcgacaggatgatcgcggaaggctttaccgggcggaagggcaag
ggcggtttctacgcgttcgacaaggcgacgaagaccaagaaagcgctcgatctcgcgacc
ggcgaatatcgcgtatcggtgaagccggcttccttgccgggccgggccgagaaggacctg
gcagcattggttgctgcgcccggcaaggtcggggcctatgcctgggaaattctcggcaag
gttctttcctatgccgcgagtctggtcggtgaagctgcggacaacatcgtcggcatcgat
gacgcgatgaagctcggctacaactggaagttcgggccgttcgaactgatcgatcgcctc
gggccgggcaagctcgccgaacggctggcggccgaggggcgggatgttcccgcgatcctc
aaggtagccggagatcggccattctaccgggtgcaggacggccgtcggcaatatctcgat
gccgccggcgactatcatgatgtcgtgcggcccgagggcgtgctgctgctggaagacatc
aagcttcatagccagccgatcctcaaaaatggctcggcggcactctgggatgtcggcgac
ggcgttgcctgccttgagttcaccggcaagatgaacgcgctcgacggcgatgtgatgaag
ctgatcggtcaggcgatcccggtcgtgcaggacaagttcaaggcgctcgtcgtctataat
gagggcagcaatttctctgccggcgccaatctcggccttgccctgttcgcgctgaacatc
gcggcatggggcgagatcgaaaagctcgtcgcgggcgggcagcaggcctacaaggcgctc
aaatatgcgccgttcccggtcgtgagcgcgccggccggcatggcgttgggcggtggttgc
gagatcctgctcaacagtgatgccgtgcaggcccatgccgaaagctatgtgggtctggtc
gagtgcggcgtgggcctgatccctggctggggcggatgcggtgaaatgatcgatcgctgg
cgctccagtcccggcatgcccaaggggccgatgccggccgttgccaaggtgttcgagacg
gtatcgacggccactgtggcaaagtcggccgccgaggcgaaggagcatggcttcctgcgt
ccgtcggacggcatcacgatgaaccgcgaccgcctgctggcggatgccaaggcgaaggca
ctggaactggcggacggttacaaaccgcccgtggctccggaattccgcttgcctggcgcg
ggaggcaagtccgctctttcgatggctgtcgaaggcttccaggcccgtggcctcgcaacc
tcctacgatggtgtcgtgtccggcgcgctcgccgacgtcctgacgggcggcgagaaggat
ctgatcgacatcgtgaccgaagaggatctgctggcgctcgagcgcaaggccttcatgcaa
ctggtgcgcgacccgcggacccaggcgcgcgtcgagcagatgctcgtcaccggcaagccg
ctgcgtaactga
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integrated database retrieval system
