Sphingobium sp. WTD-1: N6H05_27540
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Entry
N6H05_27540 CDS
T10837
Name
(GenBank) mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
spwt Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spwt02000
]
N6H05_27540
Transporters [BR:
spwt02000
]
Other transporters
Pores ion channels [TC:
1
]
N6H05_27540
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
DUF3040
Motif
Other DBs
NCBI-ProteinID:
WIA59300
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Position
unnamed2:28394..29656
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AA seq
420 aa
AA seq
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MIDSQTFSATFPFAAAMPSWLEAMLGVALLFAIAVFVNWIVKQVILKFALQLLPKDGPTP
APIVARLANIVPALILARGVGLVVHLPAGLATAIHNVANAFIILTIILAMNAALNLANRL
YQRRPDAAHRPIKGYVQVLKILLFLAGAVLVIAVVMEQSPLLLLSGLGALAAVLMLVFKD
TILSLVASVQLTSNDMLRVGDWIEMPALNADGDVIDIALHTIKVQNFDKTITSIPTYRLI
SDSFKNWRGMQDVGVRRIKRSLFIDQSSIRFLGEEDELSVRRFALIDDYLIRKQGELAQS
NDHLVEHGGDVVNGRRLTNIGTFRAYVIAYLRAQTRVSGDMALLVRQLQPTAQGLPLEIY
CFTATTIWSEYETIQADIFDHLLAILPEFDLRLYQAPSGHDVQRMSLGENAKKLIGVGDG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattcgcaaaccttctccgccactttccccttcgcggctgccatgccttcatgg
ctggaggcgatgcttggggtcgccctgctgtttgcgattgcggtcttcgtcaactggatc
gtcaagcaggtgatccttaagttcgccttgcagctgttgcccaaggacggtccgactccc
gcacctatcgtcgcgcggctcgccaatatcgtgcctgcgctcatcctcgcccgcggcgtc
ggactagtcgtgcatctgccagctggtttggcgacggcgatccataatgtcgcgaatgct
ttcatcatcctgacgatcatcctggcgatgaacgccgcgctcaatcttgcaaatcggctc
tatcagcgccggcccgatgccgcccatcgtcccatcaagggatatgtccaggtcctcaaa
atcctgctgtttcttgccggcgcggtgctggtgattgcggtggtgatggaacagtcgccg
ctgctactgctctcgggactgggcgcgctggcggcagtgctcatgctggtgttcaaggat
acgatcctgtcgctggtcgcgtcggtgcagctcacctccaacgacatgctccgggtcggg
gactggatcgagatgcccgcgctcaatgctgatggagacgtgatcgatattgccttgcac
acgatcaaagtgcagaacttcgacaagacgatcacgagcatacccacctatcggcttatc
tccgacagcttcaagaactggcgcggcatgcaggacgtcggtgtgcgacggatcaagcga
tccctcttcatcgaccagagcagcatccgctttctgggcgaagaggacgaactgagcgtg
cgccgtttcgcgctgatcgacgattatctaatccgcaaacagggcgaactggcgcaatcg
aacgatcacctcgtcgagcatggcggggatgtcgtgaacggacggcgccttaccaacatc
ggcacgtttcgcgcctatgtcatcgcgtatcttcgcgcacaaacgcgtgtgtcgggcgat
atggccctgctcgtgcgtcagctccaacctaccgcgcagggattgccgctggagatctac
tgcttcaccgcgacgacgatctggtcggaatatgaaaccatccaggccgatattttcgat
cacttgctcgcgatcctgcctgaattcgacctgcgcctctatcaggcaccgagcggccat
gacgttcaacggatgtcattgggcgagaatgcgaagaaattgatcggggtgggagatggc
tga
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