Streptococcus pyogenes M1 GAS (serotype M1): SPy_1020
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Entry
SPy_1020 CDS
T00050
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spy
Streptococcus pyogenes M1 GAS (serotype M1)
Pathway
spy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPy_1020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spy03019
]
SPy_1020
Messenger RNA biogenesis [BR:
spy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPy_1020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF6175
ODP
Motif
Other DBs
NCBI-ProteinID:
AAK33916
UniProt:
Q99ZY2
LinkDB
All DBs
Position
829386..831047
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AA seq
553 aa
AA seq
DB search
MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKG
KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS
DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDFKFDQAAREGYQTDLLRLAE
IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD
SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG
EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL
RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV
LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK
AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattaaaatgattgccttgggaggggtccgtgaatacggaaaaaacttctat
ttggtagaaattaacgattctatgtttattttagacgcagggctcaagtaccctgaaaat
gagcaacttggggtagatttagtcatccccaatttagattatgtaattgaaaacaaaggt
aaagtacaagggattttcttgagtcatggccatgctgacgccattggagcccttccttat
ttgttagctgaagtatcagctcctgtatttggatctgaattgactattgaattagccaag
ctatttgtgaaaagtaataacagcactaagaaatttaataattttcatgtggtagacagt
gatactgaaattgaatttaaagatggcctagtttcgttctttagaacaacgcattcaatc
ccagaaagtatgggtattgttattggaacagataaaggaaacattatttataccggtgac
ttcaaatttgatcaagcagcaagagaaggttatcagacggatttgctacgtttagctgag
attgggaaagaaggggttctagctcttttatcagattcagtcaatgcgacaagcaacgat
cagattgccagcgaatctgaagttggtgaagaaatggacagtgttatctctgatgctgat
ggccgtgtcattgtagctgcagtagcctcaaatcttgttcggattcagcaagtatttgat
tccgccactgcccatgggcgtcgtgttgttttaaccggaacagatgcagaaaatattgtc
agaacagctttacgtctagaaaaattaatgattacggatgagcgtcttttaattaaacct
aaggatatgtctaaattcgaagaccatgaattaatcatccttgaagctggtcgtatgggt
gagccaattaatagcttacaaaaaatggcagcgggacgtcaccgttatgttcaaatcaaa
gaaggagaccttgtttatattgtaacaacaccaagtacggctaaagaagctatggtggcg
cgtgttgaaaacttgatttacaaggccggtggttctgttaaattaatcactcaaaactta
cgtgtttcaggccatgctaatgggcgtgatttgcaactattgatgaatttgttaaaaccc
cagtatctttttccagtacaaggagaatatcgtgatttagctgcccatgcaaagctagct
gaagaagttggtatttttccagagaatattcatattctgaagcgtggcgatatcatggtg
cttaatgacgaaggttttctccatgaaggaggtgtacctgccagtgatgtcatgattgac
ggtaatgctatcggtgatgtgggtaatatcgttttacgagaccgtaaagtcttgtcagaa
gatggtattttcattgttgctattactgtttctaaaaaagaaaaacgcattatttctaag
gctaaagttaatacgcgtggatttgtgtatgtcaagaaaagtcatgatattttaagagaa
agtgcagaattagttaatacaactgttggcaattacttaaaaaaagatacctttgactgg
ggcgaattaaaagggaatgtcagagatgatttgtctaaattcttatttgaacaaaccaaa
aggcgcccagcgattctgccggttgtgatggaagttcgttag
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