Streptococcus pyogenes M1 GAS (serotype M1): SPy_1415
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Entry
SPy_1415 CDS
T00050
Symbol
deaD
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spy
Streptococcus pyogenes M1 GAS (serotype M1)
Pathway
spy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPy_1415 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spy03019
]
SPy_1415 (deaD)
03009 Ribosome biogenesis [BR:
spy03009
]
SPy_1415 (deaD)
Enzymes [BR:
spy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPy_1415 (deaD)
Messenger RNA biogenesis [BR:
spy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SPy_1415 (deaD)
Ribosome biogenesis [BR:
spy03009
]
Prokaryotic type
rRNA helicases
SPy_1415 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF1924
Motif
Other DBs
NCBI-ProteinID:
AAK34229
UniProt:
Q99Z38
LinkDB
All DBs
Position
complement(1173896..1175515)
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AA seq
539 aa
AA seq
DB search
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDKFKGDAVQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRDKRDGHDGSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcacaagacatccaatcagctgttgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaagcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccgggtcgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgaaatgcttaacatgggattc
ttggaagacattgaagctattattagtcgtgtcccagcagaccgtcaaaccttgctcttc
tccgcaacgatgccggcacctattaaacaaatcggggttaaattcatgaaagaccctgaa
catgttcaaattaagaacaaagaattaacaaacgtcaatgttgatcaatactatgttcgt
gtgaaagaacaagaaaaatttgatactatgacccgtctgatggatgttaaccagccagaa
ttatccatcgtttttgggcggactaagcgccgagttgatgaaattacacgtggcttgaaa
cttcgtggtttccgtgccgaaggaatccatggtgatcttgaccaaaataaacgcttacgt
gttatccgtgatttcaaaaacgaccaaattgatattcttgttgccactgatgtagcagcg
cgtggccttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggtcgtacaggtcgtgccggtaaatctggtgagtctatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctcttcgtccagcaactgctgaagaggcctttcaagccaagaaaaaagta
gccctcaagaaaattgaacgcgactttgcggatgagactattcgttcaaactttgataaa
ttcaaaggcgatgctgtccaattggctgccgaattcactcctgaagaattagctttatat
attttgagcttaacggttcaagatccagatagcttaccggaagttgaaattgcacgtgaa
aaaccattaccattcaaatatgtgggtggtggtcacggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgtggtgatcgccgtggcggctatcgtggtgaccgtaac
agagatgagcgtgatggtgaccgtcgtcgtcaaaaacgtgataagcgtgatggtcacgat
ggcagtggcaaccgcgatttcaaacgtaaatcaaaacgtaatagtaaagactttttcaat
aaagagaaaaaatcaagtgctaaaaatactggttttgtgattcgtcacaaaggtgaataa
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