Streptococcus pyogenes A20 (serotype M1): A20_0131
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Entry
A20_0131 CDS
T02335
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spya
Streptococcus pyogenes A20 (serotype M1)
Pathway
spya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A20_0131 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spya03021
]
A20_0131 (rpoC)
03400 DNA repair and recombination proteins [BR:
spya03400
]
A20_0131 (rpoC)
Enzymes [BR:
spya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A20_0131 (rpoC)
Transcription machinery [BR:
spya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A20_0131 (rpoC)
DNA repair and recombination proteins [BR:
spya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A20_0131 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AFV37224
LinkDB
All DBs
Position
97825..101439
Genome browser
AA seq
1204 aa
AA seq
DB search
MQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIR
YKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVI
YFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLLKRVDLAAEI
AELKEELKSASGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLRPMVQLDGGR
FAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP
GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKP
FVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEP
VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGIAVDSMPNKP
WKDNQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPGQDIQEVIDR
LDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVGIADIPVIDN
KAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIETQDPKNPIVM
MMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMT
DTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETLEERLQGRYT
RKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVCRHCYGINLA
TGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQEIFEARNPKG
EAVITEVKGNVVEIEEDASTRTKKVYVQGKTGMGEYVIPFTARMKVEVGDEVNRGAALTE
GSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDT
DLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAASFQETTRVL
TDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHTEVSAEAVFT
AEAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacattagcctcaccaagtaaggtccgttcatggtcttatggtgaagttaaa
aaacctgaaacaatcaactaccgtacattaaaaccagaacgtgaaggactctttgacgaa
gtcatctttggtccaacaaaagactgggaatgtgcgtgtggtaagtacaaacgtatccgt
tataaagggatcgtttgtgatcgctgtggggttgaggtaactcgtgctaaagtacgtcgt
gaacgtatgggtcacattgagttaaaagctcctgtatcacatatctggtatttcaaaggg
attccatctcgtatgggattgactcttgatatgagtcctcgtgcccttgaagaagtgatc
tattttgcggcttatgtggtcattgatccaaaagatacaccgcttgaaccaaaatcatta
ttaacagaacgtgaataccgtgaaaaactacaagagtatggtcatgggtcatttgtcgct
aagatgggtgctgaagccattcaagatctcttgaaacgtgtggacttggcagctgaaatc
gctgaattaaaagaagagttgaaatctgcttctggtcaaaaacggattaaagcagttcgt
cgtttagacgtccttgatgcctttaacaaatctggaaataaaccagaatggatggttctt
aacatcctgccggttattccaccagatcttcgtccgatggttcaattggatggtggtcgt
tttgcggcatcagacttgaatgacttgtaccgtcgtgtgattaaccgtaataaccgtttg
gcacgtttgttagaacttaatgcccctggcatcattgttcaaaatgaaaaacgaatgctt
caagaagccgttgatgctttgattgataatggtcgtcgtggtcgtccaatcactggacca
ggaagtcgtccattgaaatcattgagccacatgcttaaaggtaaacaagggcgtttccgt
caaaacttgcttggtaaacgtgtagacttctctggacgttccgttatcgctgttggtcca
acccttaaaatgtatcaatgtggtgtcccacgtgaaatggctatcgagctttttaaacca
tttgtaatgcgcgaaattgttgccaaagaatatgctggtaacgttaaagccgctaaacgt
atggttgaacgtggcgacgaacgcatctgggatatcttagaagaagttatcaaagaacac
ccagtcctacttaaccgcgcaccgactcttcacagacttggtattcaggcttttgaaccc
gttcttattgacggtaaggcacttcgtcttcacccacttgtgtgtgaggcctacaatgcc
gacttcgatggagaccaaatggccattcacgtgccactttcagaagaagcacaagctgaa
gctcgtcttttgatgcttgctgcagagcacatcttgaaccctaaagatggtaaaccagtt
gttactccatctcaggatatggttcttggtaactactatcttacgatggaagatgctggt
cgcgaaggcgaaggtatgattttcaaggataaagacgaagctgtgatggcatatcgtaat
ggttatgctcatcttcatagtcgtgtgggtatcgctgttgacagcatgccaaacaaacct
tggaaagacaatcaaagacataaaatcatggtgacaactgttggtaagattctctttaac
gatatcatgccagaggaccttccttacctccaagagccaaacaatgccaacttgacagaa
ggaacacctgataaatacttccttgaacctggtcaagacatccaagaagtgattgatcgc
ttagacatcaatgtgccatttaagaagaaaaacctcggtaacatcattgcggaaaccttc
aaacgtttccgtacaacagaaacatcagccttccttgaccgcttgaaagaccttggttac
taccactcaacccttgctggtttgacagtgggtatcgctgacattcctgttattgataat
aaagctgaaatcattgatgctgctcaccatcgtgttgaagaaattaacaaagccttccgt
cgtggtttgatgacagatgatgaccgttatgttgccgttacaacaacatggcgtgaagct
aaagaagcccttgaaaaacgtctgattgaaacacaagatcctaagaacccaatcgttatg
atgatggactcaggagctcgtggtaacatctcaaacttctcacagcttgctggtatgcgt
ggtttgatggctgctcctaacggacgcatcatggaacttcctatcttgtcaaacttccgt
gaaggtttgagcgttttggaaatgttcttctcaacccacggtgcacgtaaagggatgacc
gatacggcccttaaaacagccgactcaggttaccttactcgtcgtttggttgacgttgcc
caagatgttatcattcgtgaggacgattgtggcactgatcgtggtcttcttatccgtgct
attacagatggtaaagaagttaccgaaacgcttgaagagcgtcttcaaggtcgttacaca
cgtaaatcagtcaaacaccctgaaactggtgaagtcttgattggtgctgaccaattaatc
actgaagacatggctcgtaagattgttgatgcaggtgttgaagaagtgaccattcgttct
gtctttacctgtgcgactcgtcatggtgtctgccgtcactgttatggtatcaacttggca
actggtgatgctgttgaagtgggtgaagcagttggtactattgctgcccaatctatcggt
gagcctggtactcagcttaccatgcgtaccttccacacgggtggtgtagcctcaaatacc
gatatcacccagggtcttcctcgtattcaagagatctttgaagcacgtaatcctaaaggg
gaagcggtcattactgaagtgaaagggaatgtcgtcgagattgaagaagatgcgtcaact
cgtaccaagaaagtctacgttcaaggaaaaactggcatgggcgaatatgtcataccattt
acagcacgtatgaaagttgaagttggcgacgaagttaatcgcggagctgcccttacagaa
gggtcaattcaaccgaaacgtctccttgaagtgcgtgataccttgtcagttgaaacgtac
cttcttgcagaagtacaaaaagtttaccgtagccaaggggtagaaatcggagacaaacac
gttgaggtaatggttcgccaaatgcttcgtaaagttcgtgtcatggatccaggtgataca
gacctccttccaggtacacttatggatatttctgatttcacagatgctaacaaagatatt
gttatctctggtggtattcctgcgacatctcgtcctgttcttatgggtattactaaggct
tcccttgaaaccaattccttcttatcagctgcatccttccaagaaacaactcgtgttctt
acagatgctgctatccgtggtaaaaaagatcatcttcttggtcttaaagaaaatgttatc
attggtaaaatcatcccagctggtactggtatggctcgttaccgtaacattgaaccacaa
gcgatgaatgagattgaagtgattgatcatacagaagtctcagcagaagccgtttttaca
gcagaagcagaataa
DBGET
integrated database retrieval system
