Streptococcus pyogenes A20 (serotype M1): A20_0644
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Entry
A20_0644 CDS
T02335
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
spya
Streptococcus pyogenes A20 (serotype M1)
Pathway
spya02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spya00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A20_0644 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spya03021
]
A20_0644 (rpoD)
Transcription machinery [BR:
spya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A20_0644 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
DUF6494
Motif
Other DBs
NCBI-ProteinID:
AFV37729
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All DBs
Position
601748..602857
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AA seq
369 aa
AA seq
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MTKQKEITTFNVQVAEFIRHHKKEGTAIDDDVTEKLVIPFALDADQIDDLLERLTDGGIS
ITDKEGNPSSKYIVEEPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKEL
AVAVAKGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaaaaagaaataacaacttttaacgttcaagttgcggagtttattcgccat
cacaaaaaagaaggaacagcgattgatgatgacgtgaccgaaaaacttgtcattccattt
gctttggatgctgatcagattgatgacttacttgagcggttaacagatggtggtatctcg
attacggataaagaaggtaacccatcatcaaaatacattgttgaagaaccaaaaccagaa
gaattaactgatgaagaattaattggtagtaattcagctaaagtaaacgaccctgtccgc
atgtacctcaaagaaattggtgtggtaccgcttttaacaagtgaagaggaaaaagaattg
gctgttgcggttgccaagggagatttaatggctaaacaacgtttagcggaagcaaacctt
cgtcttgttgtctcaattgcaaaacgttatgttggacgtggaatgcaatttcttgattta
attcaagaaggtaacatgggactcatgaaagctgttgataaatttgattattcaaaagga
ttcaaattctcaacttatgcaacatggtggattcgtcaagctataacacgcgcaattgca
gatcaagcacgtacgattcgtatccctgttcatatggttgaaaccattaataaattggtt
cgtgaacaacgtaaccttcttcaagaacttggtcaagatccaacgccagaacaaatcgca
gaacgtatggaaatgactccagacaaggttcgtgaaattctaaaaattgctcaagaacct
gtttctttagaaacaccaattggggaagaagatgatagtcacttaggtgattttatcgaa
gatgaagttattgaaaatccagtagattatacgacgcgtgttgttcttcgtgagcaattg
gatgaagttttagatacgcttactgaccgtgaagagaacgttcttcgcctacgctttggc
cttgacgatggtaaaatgcgtacgttagaggacgtaggtaaagtctttaatgttactcgt
gagcgcattcgacagattgaagctaaagcccttagaaaacttcgccatcctagtcgtagt
aaacaattaagagactttatagaggactaa
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