Streptococcus pyogenes A20 (serotype M1): A20_0790
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Entry
A20_0790 CDS
T02335
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spya
Streptococcus pyogenes A20 (serotype M1)
Pathway
spya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A20_0790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spya03019
]
A20_0790
Messenger RNA biogenesis [BR:
spya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A20_0790
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
DUF6175
Regulator_TrmB
ODP
Motif
Other DBs
NCBI-ProteinID:
AFV37872
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Position
746674..748335
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AA seq
553 aa
AA seq
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MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKG
KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS
DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIIYTGDFKFDQAAREGYQTDLLRLAE
IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD
SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG
EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL
RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV
LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK
AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattaaaatgattgccttgggaggggtccgtgaatacggaaaaaacttctat
ttggtagaaattaacgattctatgtttattttagacgcagggctcaagtaccctgaaaat
gagcaacttggggtagatttagtcatccccaatttagattatgtaattgaaaacaaaggt
aaagtacaagggattttcttgagtcatggccatgctgacgccattggagcccttccttat
ttgttagctgaagtatcagctcctgtatttggatctgaattgactattgaattagccaag
ctatttgtgaaaagtaataacagcactaagaaatttaataattttcatgtggtagacagt
gatactgaaattgaatttaaagatggcctagtttcgttctttagaacaacgcattcaatc
ccagaaagtatgggtattgttattggaacagataaaggaaacattatttataccggtgac
ttcaaatttgatcaagcagcaagagaaggttatcagacggatttgctacgtttagctgag
attgggaaagaaggggttctagctcttttatcagattcagtcaatgcgacaagcaacgat
cagattgccagcgaatctgaagttggtgaagaaatggacagtgttatctctgatgctgat
ggccgtgtcattgtagctgcagtagcctcaaatcttgttcggattcagcaagtatttgat
tccgccactgcccatgggcgtcgtgttgttttaaccggaacagatgcagaaaatattgtc
agaacagctttacgtctagaaaaattaatgattacggatgagcgtcttttaattaaacct
aaggatatgtctaaattcgaagaccatgaattaatcatccttgaagctggtcgtatgggt
gagccaattaatagcttacaaaaaatggcagcgggacgtcaccgttatgttcaaatcaaa
gaaggagaccttgtttatattgtaacaacaccaagtacggctaaagaagctatggtggcg
cgtgttgaaaacttgatttacaaggccggtggttctgttaaattaatcactcaaaactta
cgtgtttcaggccatgctaatgggcgtgatttgcaactattgatgaatttgttaaaaccc
cagtatctttttccagtacaaggagaatatcgtgatttagctgcccatgcaaagctagct
gaagaagttggtatttttccagagaatattcatattctgaagcgtggcgatatcatggtg
cttaatgacgaaggttttctccatgaaggaggtgtacctgccagtgatgtcatgattgac
ggtaatgctatcggtgatgtgggtaatatcgttttacgagaccgtaaagtcttgtcagaa
gatggtattttcattgttgctattactgtttctaaaaaagaaaaacgcattatttctaag
gctaaagttaatacgcgtggatttgtgtatgtcaagaaaagtcatgatattttaagagaa
agtgcagaattagttaatacaactgttggcaattacttaaaaaaagatacctttgactgg
ggcgaattaaaagggaatgtcagagatgatttgtctaaattcttatttgaacaaaccaaa
aggcgcccagcgattctgccggttgtgatggaagttcgttag
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