Streptococcus pyogenes A20 (serotype M1): A20_1641
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Entry
A20_1641 CDS
T02335
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spya
Streptococcus pyogenes A20 (serotype M1)
Pathway
spya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A20_1641 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spya03019
]
A20_1641 (rnjA)
Messenger RNA biogenesis [BR:
spya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A20_1641 (rnjA)
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AFV38709
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Position
1551898..1553580
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AA seq
560 aa
AA seq
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MTNISLKPNEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREAT
VYEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVGDPADL
QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNTQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDKH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatcagtttaaaacctaatgaagttggggtgtttgccattggtggtctggga
gagattgggaagaatacttatggtattgagtatcaagacgaaatcattatcgttgatgcc
ggtatcaaattcccagaagatgatcttttgggaattgattacgttattccagactattct
tacattgtcgataacttagaccgggtcaaagctcttgttattacacatggtcacgaagac
cacattggtggtattccatttcttctcaaacaggctaatatccctatctacgcaggacct
ttagcacttgctcttatccgtggtaaattggaagaacatggtctttggcgtgaagcaact
gtttacgaaatcaatcacaacaccgagttaacttttaaaaacatgagcgtcactttcttc
aagactactcattccattccagaaccggtcggtattgttatccacacccctcaaggtaag
attatctgtactggtgattttaaatttgacttcacgccagtaggagatcctgcagattta
caacgtatggcagcgcttggtgaagaaggtgtcctttgcttattatcagactcaactaat
gctgaaatcccaacctttactaactctgaaaaagttgttggccaatccattttaaaaatt
atcgaaggtattcatggtcgtattatttttgcttccttcgcttcaaacatctaccgtttg
caacaggctgcagaagctgctgttaaaacgggacgtaaaattgccgtttttggtcgttct
atggaaaaagcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaaaatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaatggcactcatcgtcaa
gtaactttacagcctggtgatactgtgattttctcatcaagtccaatccctggtaatacc
acaagtgtcaataaattaatcaataccatccaagaagctggtgttgatgttattcatgga
aaagtcaataatattcatacttctggtcatggaggacagcaagaacaaaagctcatgctt
agtttgattaaaccaaaatatttcatgccagtacatggtgagtatcgcatgcaaaaagtt
catgcaggactggcgatggatattggtattccaaaagaaaatatctttattatggaaaat
ggagacgttctagctttaaccagtgacagtgcgcgtattgctggtcactttaatgcccaa
gacatctacgtggatggtaatggcatcggggatattggagcagccgttttacgggaccgc
cgtgatttgtcagaagatggtgttgtcttagctgttgcaactgttgattttaacacacaa
atgattttagctggaccagatattctgagccgtggtttcatttatatgcgtgagtcaggt
gacttgatccgcgaaagccaacgtgtgctctttaacgctatccgtattgctttaaaaaat
aaggatgctagcatccaatcagttaacggtgctatcgtcaatgctcttcgtccattcttg
tatgaaaagactgagcgtgaaccaattatcattccgatggtcttaacacctgataagcac
taa
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