Sphingopyxis sp. YF1: EAO27_00290
Help
Entry
EAO27_00290 CDS
T10727
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf00730
Thiamine metabolism
spyf01100
Metabolic pathways
spyf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EAO27_00290 (thiC)
Enzymes [BR:
spyf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EAO27_00290 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UNU41314
LinkDB
All DBs
Position
complement(47037..48926)
Genome browser
AA seq
629 aa
AA seq
DB search
MADIDSRIETKPGAIGVTTGPIRGSRKIHVASPTGSGIRVAMREIDLDPHSGEPGVRVYD
TSGPYTDPNASIDIAAGLPELRASWIRARGDVEEVTQREVRPEDNGQLGPDRSGGVPAFP
NVKKQVLRAKPGQNVSQMHYARRGIVTPEMEYVATRENLGRERLAEYVRDGQDWGASIPD
YVTPEFVRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKM
VWSIRWGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELSWEIFR
DTLIEQAEQGVDYFTIHAGVRLPYVPLAAKRVTGIVSRGGSIMAKWCLAHHKESFLYERF
DEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGPG
HVPMHKIKENMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYV
TPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSKARFEFRWRDQFNLS
LDPDTAEQYHDQTLPAEGAKSAHFCSMCGPKFCSMKISQEVRDFAKLQNQDSAGFIAAEE
AEKGMAEMSQVYEDTGRELYMGAGGREHD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgattcccgcattgaaacgaaaccgggcgcgatcggcgtcaccaccggg
ccgatccgcggcagccgcaagatccatgtcgcctcgcccaccggcagcggcatccgcgtc
gcgatgcgcgagatcgacctcgatccgcattcgggcgaacccggcgtccgcgtctacgac
accagcggcccctacaccgaccccaatgcgagcatcgacatcgccgcgggcctccccgaa
ctgcgcgccagctggatccgcgcgcgcggcgacgtcgaggaggtgacccagcgcgaggtg
cggcccgaggacaacggccagctcggccccgaccgctcgggcggcgtccccgccttcccc
aatgtgaagaagcaggtcctccgcgccaaaccggggcagaacgtcagccagatgcactac
gcccgccgcggcatcgtcacccccgagatggaatatgtcgcgacccgcgagaatctcggc
cgcgagcgcctcgccgaatatgtccgcgacgggcaggactggggcgcgagcatccccgat
tacgtcacccccgaattcgtccgcgacgaagtggcgcgcggccgcgcgatcatccccagc
aacatcaaccaccccgaatccgagccgatggcgatcggccgcaacttcctcgtcaagatc
aacgccaatatcggcaacagcgcggtcgcgtccgacgtcgcgagcgaggttgacaagatg
gtctggtcgatccgctggggcgccgacaccgtcatggacctcagcaccggccgcaacatc
cacgacacgcgcgaatggatcatccgcaattcgcccgtgccgatcggcaccgttcccatc
tatcaggcgctcgaaaaggtcggcggcatcgccgaggagctcagctgggaaatcttccgc
gacacgctgatcgaacaggccgagcagggcgtcgactatttcaccatccacgcgggcgtg
cgcctgccctacgtgccgctcgccgcgaagcgcgtcaccggcatcgtcagccgcggcggc
agcatcatggcgaaatggtgcctcgcgcatcacaaggaaagcttcctctacgaacgcttc
gacgagatcaccgagatcatgaaggcctatgacatcgcctactccttgggcgacggcctc
cgccccggcagcatcgccgacgccaacgacgaggcgcagttcgccgagctctacacgctc
ggcgagctcaccaagcgcgcgtgggagcaggatgtgcaggtgatgatcgagggcccgggc
cacgtcccgatgcacaagatcaaggagaatatggacaagcagctcgaagcgtgcggcgag
gcgcccttctacaccttggggccgctcaccaccgacatcgcgcccggctacgaccatatc
accagcggcatcggcgccgcgatgatcggctggtacggcaccgcgatgctttgctacgtc
acgccgaaggagcatctcggcctgcccgaccgcgacgatgtgaaggtcggcgtcgtcacc
tacaagctcgccgcgcacgccgccgacctcgccaagggccaccccgccgccaaggtccgc
gatgatgcgctgagcaaggcgcgcttcgaattccgctggcgcgaccagttcaacctgagc
ctcgaccccgacaccgccgagcaatatcacgaccagacgctccccgccgagggcgccaag
tcggcgcatttctgcagcatgtgcggccccaaattctgctcgatgaagatcagccaggaa
gtccgcgacttcgccaagctgcaaaatcaggacagcgccggcttcatcgcggcggaggag
gccgagaagggcatggcggaaatgagccaggtctatgaggacacggggcgcgaactgtat
atgggcgcgggtgggcgcgagcatgattga
DBGET
integrated database retrieval system
