Sphingopyxis sp. YF1: EAO27_01710
Help
Entry
EAO27_01710 CDS
T10727
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spyf Sphingopyxis sp. YF1
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_01710
Transporters [BR:
spyf02000
]
Other transporters
Pores ion channels [TC:
1
]
EAO27_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
UNU41565
LinkDB
All DBs
Position
345626..346747
Genome browser
AA seq
373 aa
AA seq
DB search
MRKLAAAVALASTALATPALARDNSWYVGVGGGVMIVEDMDLDIGTFNNSGSLDHKTGYD
FEGTVGYDFGGFRAEVEVGYREADIKGGRFVTPGIPASANGSGNLVTGSVPLNGDSNALS
FMVNGMLDFGDDDGLQGFIGGGAGVARVDVAPVYAGPFLDDSDTGFAWQAIAGVRAPLTR
NIDVGLKYRFFNVNNIDLVDQIGRDVSTRFRSHSILGTLTFNFGGAEPAPPPPPPPPPPP
PPPPPPPPPPPPPPVVCEPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCSGTQVWLA
GHADRSGAATYNVGLSKRRNDAVQSYLTARGISAGSISAEAFGESRPAVATADGVRNDQN
RRVEIKYGPGSGN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcttgccgccgccgtggcgttggcctccactgcccttgcgacgccggctctg
gcgcgtgacaactcctggtatgtgggagttgggggcggtgtaatgatcgtcgaagacatg
gatctcgacatcggcaccttcaacaattcgggttcgctcgatcacaagaccggttacgac
ttcgaaggcaccgtcggttacgacttcggcggtttccgcgcggaagtcgaagtcggttat
cgcgaagccgacatcaagggcggtcgtttcgtgacccccggcattcccgcttcggccaat
ggctcgggcaatctggtcaccggcagcgttccgctgaacggcgactcgaacgcgctgagc
ttcatggtcaacggcatgctcgacttcggcgacgatgacggcctccagggcttcatcggc
ggtggcgccggtgtcgctcgcgtcgatgtcgctccggtctacgccggtccgttcctcgac
gattcggatacgggctttgcctggcaggcgatcgctggcgttcgtgcgccgctgacccgc
aacatcgatgtcggcctgaagtatcgcttcttcaacgtcaacaacatcgacctggtcgac
cagatcggtcgcgacgtttcgacgcgcttccgttcgcactcgatcctcggcacgctgacg
ttcaacttcggtggtgcggaaccggctcccccgccgccgccgcctccgccgccgccgccg
ccgccgcctcccccgccgcctccgccgccgcctccgccgccggtggtgtgcgagcccggg
ccgtacatcgtgtatttcgactgggatcagtcgaacatcacgccggaagcggcttcgacg
ctggacaacgcgatcagcgcctacaaccgtggctgctcgggtacgcaggtctggctcgcc
ggtcacgccgaccgttcgggcgccgcgacctacaacgtcggtctgtcgaagcgtcgcaac
gacgcggtccagagctatctgaccgctcgcggcatctcggccggttcgatcagcgcggaa
gcgttcggcgaaagccgtccggccgtggcgaccgccgacggcgtccgcaacgaccagaac
cgtcgcgtggaaatcaaatacggtccgggttcgggcaactaa
DBGET
integrated database retrieval system
